Protein–RNA interactions for Protein: A6NEF3

GOLGA6L4, Golgin subfamily A member 6-like protein 4, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA6L4A6NEF3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.63■□□□□ 0.57
GOLGA6L4A6NEF3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GOLGA6L4A6NEF3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.63■□□□□ 0.57
GOLGA6L4A6NEF3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.63■□□□□ 0.57
GOLGA6L4A6NEF3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GOLGA6L4A6NEF3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
GOLGA6L4A6NEF3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GOLGA6L4A6NEF3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
GOLGA6L4A6NEF3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC18.63■□□□□ 0.57
GOLGA6L4A6NEF3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
GOLGA6L4A6NEF3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
GOLGA6L4A6NEF3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GOLGA6L4A6NEF3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GOLGA6L4A6NEF3 AC136621.1-201ENST00000624017 2304 ntBASIC18.62■□□□□ 0.57
GOLGA6L4A6NEF3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
GOLGA6L4A6NEF3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.62■□□□□ 0.57
GOLGA6L4A6NEF3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GOLGA6L4A6NEF3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GOLGA6L4A6NEF3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
GOLGA6L4A6NEF3 RPS2P28-201ENST00000314255 741 ntBASIC18.62■□□□□ 0.57
GOLGA6L4A6NEF3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.62■□□□□ 0.57
GOLGA6L4A6NEF3 AL513480.1-201ENST00000451731 511 ntBASIC18.62■□□□□ 0.57
GOLGA6L4A6NEF3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.62■□□□□ 0.57
GOLGA6L4A6NEF3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.62■□□□□ 0.57
GOLGA6L4A6NEF3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
GOLGA6L4A6NEF3 CXCL1P1-201ENST00000502804 216 ntBASIC18.62■□□□□ 0.57
GOLGA6L4A6NEF3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.62■□□□□ 0.57
GOLGA6L4A6NEF3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.62■□□□□ 0.57
GOLGA6L4A6NEF3 AL031432.2-201ENST00000566714 459 ntBASIC18.62■□□□□ 0.57
GOLGA6L4A6NEF3 AL928711.1-201ENST00000570165 459 ntBASIC18.62■□□□□ 0.57
GOLGA6L4A6NEF3 MIR3909-201ENST00000579518 119 ntBASIC18.62■□□□□ 0.57
GOLGA6L4A6NEF3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.62■□□□□ 0.57
GOLGA6L4A6NEF3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
GOLGA6L4A6NEF3 AL645728.2-201ENST00000641974 660 ntBASIC18.62■□□□□ 0.57
GOLGA6L4A6NEF3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
GOLGA6L4A6NEF3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GOLGA6L4A6NEF3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GOLGA6L4A6NEF3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
GOLGA6L4A6NEF3 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 AC006058.4-201ENST00000624016 1670 ntBASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 AP002414.3-201ENST00000589352 1468 ntBASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 OR7E47P-204ENST00000575924 449 ntBASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 CICP13-201ENST00000422015 2789 ntBASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 AC023157.3-201ENST00000619086 2088 ntBASIC18.61■□□□□ 0.57
GOLGA6L4A6NEF3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.6■□□□□ 0.57
GOLGA6L4A6NEF3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GOLGA6L4A6NEF3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GOLGA6L4A6NEF3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.6■□□□□ 0.57
GOLGA6L4A6NEF3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
GOLGA6L4A6NEF3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GOLGA6L4A6NEF3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.6■□□□□ 0.57
GOLGA6L4A6NEF3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GOLGA6L4A6NEF3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GOLGA6L4A6NEF3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC18.6■□□□□ 0.57
GOLGA6L4A6NEF3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.6■□□□□ 0.57
GOLGA6L4A6NEF3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.6■□□□□ 0.57
GOLGA6L4A6NEF3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.6■□□□□ 0.57
GOLGA6L4A6NEF3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms