Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AC016027.1-202ENST00000607927 1699 ntBASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 BANP-201ENST00000286122 2368 ntTSL 5 BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 FAM8A3P-201ENST00000427218 844 ntBASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 KRT18P34-201ENST00000488218 1270 ntBASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AC027307.2-201ENST00000591252 911 ntBASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AP001059.3-201ENST00000619053 235 ntBASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AC008267.7-201ENST00000624570 1194 ntBASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRBV4S1A1TA0A5B7 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms