Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 ZBED1P1-201ENST00000502364 1930 ntBASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 AC023024.2-201ENST00000623561 1993 ntBASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 AP002469.2-201ENST00000531724 424 ntBASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 MIR4321-201ENST00000592276 80 ntBASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 MTDHP4-201ENST00000600287 670 ntBASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 AC127383.1-201ENST00000444697 1800 ntBASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.05■□□□□ 0
TCRBV3S1A0A5B6 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
TCRBV3S1A0A5B6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
TCRBV3S1A0A5B6 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.05■□□□□ 0
TCRBV3S1A0A5B6 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
TCRBV3S1A0A5B6 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.05■□□□□ 0
TCRBV3S1A0A5B6 AC140479.7-201ENST00000636301 2332 ntBASIC15.05■□□□□ 0
TCRBV3S1A0A5B6 AC063926.3-201ENST00000624734 5658 ntBASIC15.05■□□□□ 0
TCRBV3S1A0A5B6 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TCRBV3S1A0A5B6 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.05■□□□□ 0
TCRBV3S1A0A5B6 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.05■□□□□ 0
TCRBV3S1A0A5B6 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TCRBV3S1A0A5B6 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 AC069148.1-201ENST00000608741 768 ntBASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.05■□□□□ -0
TCRBV3S1A0A5B6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 AC041040.2-201ENST00000622926 2899 ntBASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 RPS15P9-201ENST00000494093 319 ntBASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.04■□□□□ -0
TCRBV3S1A0A5B6 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms