Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 AC134407.2-201ENST00000625089 1978 ntBASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRGV5A0A0B4J1U4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 MYCLP2-201ENST00000449268 967 ntBASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 RN7SL752P-201ENST00000463779 287 ntBASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 AC011495.1-201ENST00000498085 584 ntBASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 AC123567.1-201ENST00000548294 1261 ntBASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 RRP7BP-205ENST00000566851 833 ntBASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 AC093726.1-201ENST00000608064 963 ntBASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
TRGV5A0A0B4J1U4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV5A0A0B4J1U4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV5A0A0B4J1U4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV5A0A0B4J1U4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRGV5A0A0B4J1U4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRGV5A0A0B4J1U4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV5A0A0B4J1U4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV5A0A0B4J1U4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
TRGV5A0A0B4J1U4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.34□□□□□ -0.11
TRGV5A0A0B4J1U4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRGV5A0A0B4J1U4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRGV5A0A0B4J1U4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV5A0A0B4J1U4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV5A0A0B4J1U4 MIR648-201ENST00000385046 94 ntBASIC14.34□□□□□ -0.11
TRGV5A0A0B4J1U4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV5A0A0B4J1U4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV5A0A0B4J1U4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRGV5A0A0B4J1U4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TRGV5A0A0B4J1U4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.34□□□□□ -0.11
TRGV5A0A0B4J1U4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV5A0A0B4J1U4 PHKG1P2-201ENST00000457537 863 ntBASIC14.34□□□□□ -0.11
TRGV5A0A0B4J1U4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV5A0A0B4J1U4 AC104596.2-201ENST00000512793 793 ntBASIC14.34□□□□□ -0.11
TRGV5A0A0B4J1U4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.34□□□□□ -0.11
TRGV5A0A0B4J1U4 RARRES2P5-201ENST00000564013 466 ntBASIC14.34□□□□□ -0.11
TRGV5A0A0B4J1U4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms