Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 DGCR5-201ENST00000399539 862 ntBASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 INE1-201ENST00000456273 945 ntBASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 AC106886.1-201ENST00000568660 600 ntBASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA9Q9Y5G4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.05■□□□□ 0
PCDHGA9Q9Y5G4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.05■□□□□ 0
PCDHGA9Q9Y5G4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.05■□□□□ 0
PCDHGA9Q9Y5G4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.05■□□□□ 0
PCDHGA9Q9Y5G4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.05■□□□□ 0
PCDHGA9Q9Y5G4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.05■□□□□ 0
PCDHGA9Q9Y5G4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PCDHGA9Q9Y5G4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
PCDHGA9Q9Y5G4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PCDHGA9Q9Y5G4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PCDHGA9Q9Y5G4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.05■□□□□ 0
PCDHGA9Q9Y5G4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
PCDHGA9Q9Y5G4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 MEP1AP4-201ENST00000423244 1087 ntBASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 AC114501.2-201ENST00000439631 535 ntBASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 GNAQP1-201ENST00000444815 1067 ntBASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 AL512361.1-201ENST00000554200 418 ntBASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 IGHV3-72-202ENST00000621503 303 ntBASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 AL139011.1-202ENST00000642063 584 ntBASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.05■□□□□ -0
PCDHGA9Q9Y5G4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms