Protein–RNA interactions for Protein: Q9Y2Y8

PRG3, Proteoglycan 3, humanhuman

Predicted RBP Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG3Q9Y2Y8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRG3Q9Y2Y8 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.13■□□□□ 0.33
PRG3Q9Y2Y8 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PRG3Q9Y2Y8 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRG3Q9Y2Y8 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.12■□□□□ 0.33
PRG3Q9Y2Y8 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRG3Q9Y2Y8 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PRG3Q9Y2Y8 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.12■□□□□ 0.33
PRG3Q9Y2Y8 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRG3Q9Y2Y8 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.12■□□□□ 0.33
PRG3Q9Y2Y8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRG3Q9Y2Y8 ME2P1-201ENST00000426028 1970 ntBASIC17.12■□□□□ 0.33
PRG3Q9Y2Y8 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRG3Q9Y2Y8 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PRG3Q9Y2Y8 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.12■□□□□ 0.33
PRG3Q9Y2Y8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.12■□□□□ 0.33
PRG3Q9Y2Y8 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.12■□□□□ 0.33
PRG3Q9Y2Y8 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.12■□□□□ 0.33
PRG3Q9Y2Y8 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.12■□□□□ 0.33
PRG3Q9Y2Y8 RRP7BP-205ENST00000566851 833 ntBASIC17.12■□□□□ 0.33
PRG3Q9Y2Y8 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.12■□□□□ 0.33
PRG3Q9Y2Y8 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
PRG3Q9Y2Y8 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
PRG3Q9Y2Y8 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.12■□□□□ 0.33
PRG3Q9Y2Y8 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRG3Q9Y2Y8 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRG3Q9Y2Y8 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRG3Q9Y2Y8 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRG3Q9Y2Y8 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRG3Q9Y2Y8 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRG3Q9Y2Y8 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRG3Q9Y2Y8 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRG3Q9Y2Y8 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.12■□□□□ 0.33
PRG3Q9Y2Y8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 AC079776.1-201ENST00000401540 1152 ntBASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 AC112492.5-201ENST00000421897 457 ntBASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 EEF1DP4-201ENST00000446006 880 ntBASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 KRT17P8-201ENST00000540749 863 ntBASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 AL162274.1-201ENST00000617191 1098 ntBASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 MIR6752-201ENST00000618442 71 ntBASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 AGGF1P2-201ENST00000426656 2106 ntBASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.11■□□□□ 0.33
PRG3Q9Y2Y8 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.1■□□□□ 0.33
PRG3Q9Y2Y8 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRG3Q9Y2Y8 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRG3Q9Y2Y8 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRG3Q9Y2Y8 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRG3Q9Y2Y8 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
PRG3Q9Y2Y8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.1■□□□□ 0.33
PRG3Q9Y2Y8 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRG3Q9Y2Y8 AC134407.2-201ENST00000625089 1978 ntBASIC17.1■□□□□ 0.33
PRG3Q9Y2Y8 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PRG3Q9Y2Y8 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRG3Q9Y2Y8 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRG3Q9Y2Y8 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRG3Q9Y2Y8 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.1■□□□□ 0.33
PRG3Q9Y2Y8 AC074338.1-201ENST00000416825 156 ntBASIC17.1■□□□□ 0.33
PRG3Q9Y2Y8 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.1■□□□□ 0.33
PRG3Q9Y2Y8 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PRG3Q9Y2Y8 ACA64.2-201ENST00000459014 129 ntBASIC17.1■□□□□ 0.33
PRG3Q9Y2Y8 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PRG3Q9Y2Y8 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.1■□□□□ 0.33
PRG3Q9Y2Y8 RAB43P1-201ENST00000561790 589 ntBASIC17.1■□□□□ 0.33
PRG3Q9Y2Y8 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.1■□□□□ 0.33
PRG3Q9Y2Y8 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.1■□□□□ 0.33
PRG3Q9Y2Y8 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRG3Q9Y2Y8 TMEM261P1-201ENST00000604899 340 ntBASIC17.1■□□□□ 0.33
PRG3Q9Y2Y8 AC017083.2-201ENST00000608069 979 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms