Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 AP006294.1-201ENST00000415407 339 ntBASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 AC114501.2-201ENST00000439631 535 ntBASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 AL512361.1-201ENST00000554200 418 ntBASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 AC104794.3-201ENST00000566840 1248 ntBASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2IPQ9Y2D8 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SSX2IPQ9Y2D8 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SSX2IPQ9Y2D8 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.3■□□□□ 0.36
SSX2IPQ9Y2D8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SSX2IPQ9Y2D8 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSX2IPQ9Y2D8 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SSX2IPQ9Y2D8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSX2IPQ9Y2D8 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSX2IPQ9Y2D8 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SSX2IPQ9Y2D8 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.3■□□□□ 0.36
SSX2IPQ9Y2D8 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.3■□□□□ 0.36
SSX2IPQ9Y2D8 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSX2IPQ9Y2D8 SPDYE19P-201ENST00000338590 713 ntBASIC17.3■□□□□ 0.36
SSX2IPQ9Y2D8 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.3■□□□□ 0.36
SSX2IPQ9Y2D8 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.3■□□□□ 0.36
SSX2IPQ9Y2D8 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.3■□□□□ 0.36
SSX2IPQ9Y2D8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.3■□□□□ 0.36
SSX2IPQ9Y2D8 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSX2IPQ9Y2D8 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSX2IPQ9Y2D8 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SSX2IPQ9Y2D8 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSX2IPQ9Y2D8 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.3■□□□□ 0.36
SSX2IPQ9Y2D8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SSX2IPQ9Y2D8 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.3■□□□□ 0.36
SSX2IPQ9Y2D8 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSX2IPQ9Y2D8 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SSX2IPQ9Y2D8 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 AC044860.1-202ENST00000559481 777 ntBASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 AL365330.1-201ENST00000607459 531 ntBASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 AL008721.1-201ENST00000609964 604 ntBASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms