Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 PCGF3-213ENST00000620529 1899 ntBASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDZRN3Q9UPQ7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDZRN3Q9UPQ7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.71■□□□□ 0.91
PDZRN3Q9UPQ7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDZRN3Q9UPQ7 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDZRN3Q9UPQ7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDZRN3Q9UPQ7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDZRN3Q9UPQ7 REXO1L8P-201ENST00000604378 1897 ntBASIC20.71■□□□□ 0.91
PDZRN3Q9UPQ7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
PDZRN3Q9UPQ7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDZRN3Q9UPQ7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDZRN3Q9UPQ7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDZRN3Q9UPQ7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDZRN3Q9UPQ7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PDZRN3Q9UPQ7 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDZRN3Q9UPQ7 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC20.71■□□□□ 0.91
PDZRN3Q9UPQ7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDZRN3Q9UPQ7 AC022494.1-201ENST00000466044 728 ntBASIC20.71■□□□□ 0.91
PDZRN3Q9UPQ7 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.71■□□□□ 0.91
PDZRN3Q9UPQ7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC20.71■□□□□ 0.91
PDZRN3Q9UPQ7 RN7SL828P-201ENST00000607615 303 ntBASIC20.71■□□□□ 0.91
PDZRN3Q9UPQ7 AL589739.1-201ENST00000607720 493 ntBASIC20.71■□□□□ 0.91
PDZRN3Q9UPQ7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDZRN3Q9UPQ7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDZRN3Q9UPQ7 AC105917.1-201ENST00000506637 2539 ntBASIC20.71■□□□□ 0.91
PDZRN3Q9UPQ7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDZRN3Q9UPQ7 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDZRN3Q9UPQ7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC20.7■□□□□ 0.9
PDZRN3Q9UPQ7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDZRN3Q9UPQ7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDZRN3Q9UPQ7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDZRN3Q9UPQ7 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDZRN3Q9UPQ7 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDZRN3Q9UPQ7 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC20.7■□□□□ 0.9
PDZRN3Q9UPQ7 AC011495.1-201ENST00000498085 584 ntBASIC20.7■□□□□ 0.9
PDZRN3Q9UPQ7 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDZRN3Q9UPQ7 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
PDZRN3Q9UPQ7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC20.7■□□□□ 0.9
PDZRN3Q9UPQ7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC20.7■□□□□ 0.9
PDZRN3Q9UPQ7 AC017083.2-201ENST00000608069 979 ntBASIC20.7■□□□□ 0.9
PDZRN3Q9UPQ7 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.7■□□□□ 0.9
PDZRN3Q9UPQ7 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.7■□□□□ 0.9
PDZRN3Q9UPQ7 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.7■□□□□ 0.9
PDZRN3Q9UPQ7 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.7■□□□□ 0.9
PDZRN3Q9UPQ7 MIR6799-201ENST00000620297 69 ntBASIC20.7■□□□□ 0.9
PDZRN3Q9UPQ7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.7■□□□□ 0.9
PDZRN3Q9UPQ7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDZRN3Q9UPQ7 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC20.7■□□□□ 0.9
PDZRN3Q9UPQ7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PDZRN3Q9UPQ7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PDZRN3Q9UPQ7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC20.7■□□□□ 0.9
PDZRN3Q9UPQ7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDZRN3Q9UPQ7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PDZRN3Q9UPQ7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PDZRN3Q9UPQ7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC20.7■□□□□ 0.9
PDZRN3Q9UPQ7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 AP006294.1-201ENST00000415407 339 ntBASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 AC104794.3-201ENST00000566840 1248 ntBASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 SPTSSB-204ENST00000617024 1292 ntBASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms