Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SALL1Q9NSC2 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SALL1Q9NSC2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SALL1Q9NSC2 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SALL1Q9NSC2 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.23■□□□□ 0.67
SALL1Q9NSC2 REXO1L1P-202ENST00000608646 1974 ntBASIC19.23■□□□□ 0.67
SALL1Q9NSC2 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SALL1Q9NSC2 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SALL1Q9NSC2 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.23■□□□□ 0.67
SALL1Q9NSC2 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.23■□□□□ 0.67
SALL1Q9NSC2 GLI4-203ENST00000517468 963 ntTSL 5 BASIC19.23■□□□□ 0.67
SALL1Q9NSC2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.23■□□□□ 0.67
SALL1Q9NSC2 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC19.23■□□□□ 0.67
SALL1Q9NSC2 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC19.23■□□□□ 0.67
SALL1Q9NSC2 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SALL1Q9NSC2 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SALL1Q9NSC2 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC19.23■□□□□ 0.67
SALL1Q9NSC2 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
SALL1Q9NSC2 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
SALL1Q9NSC2 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC19.23■□□□□ 0.67
SALL1Q9NSC2 AC132938.2-201ENST00000579188 680 ntBASIC19.23■□□□□ 0.67
SALL1Q9NSC2 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC19.23■□□□□ 0.67
SALL1Q9NSC2 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC19.23■□□□□ 0.67
SALL1Q9NSC2 AL591163.1-201ENST00000641757 987 ntBASIC19.23■□□□□ 0.67
SALL1Q9NSC2 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SALL1Q9NSC2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SALL1Q9NSC2 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SALL1Q9NSC2 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.22■□□□□ 0.67
SALL1Q9NSC2 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SALL1Q9NSC2 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SALL1Q9NSC2 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SALL1Q9NSC2 AL365203.3-201ENST00000609742 2057 ntBASIC19.22■□□□□ 0.67
SALL1Q9NSC2 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SALL1Q9NSC2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SALL1Q9NSC2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SALL1Q9NSC2 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SALL1Q9NSC2 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SALL1Q9NSC2 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.22■□□□□ 0.67
SALL1Q9NSC2 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SALL1Q9NSC2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
SALL1Q9NSC2 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SALL1Q9NSC2 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SALL1Q9NSC2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SALL1Q9NSC2 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SALL1Q9NSC2 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SALL1Q9NSC2 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
SALL1Q9NSC2 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC19.22■□□□□ 0.67
SALL1Q9NSC2 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC19.22■□□□□ 0.67
SALL1Q9NSC2 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SALL1Q9NSC2 RN7SL837P-201ENST00000463010 287 ntBASIC19.22■□□□□ 0.67
SALL1Q9NSC2 RN7SL399P-201ENST00000471648 279 ntBASIC19.22■□□□□ 0.67
SALL1Q9NSC2 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SALL1Q9NSC2 AC092552.1-201ENST00000547243 906 ntBASIC19.22■□□□□ 0.67
SALL1Q9NSC2 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.22■□□□□ 0.67
SALL1Q9NSC2 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC19.22■□□□□ 0.67
SALL1Q9NSC2 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.22■□□□□ 0.67
SALL1Q9NSC2 WFDC1-204ENST00000613603 549 ntBASIC19.22■□□□□ 0.67
SALL1Q9NSC2 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19.22■□□□□ 0.67
SALL1Q9NSC2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SALL1Q9NSC2 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC19.21■□□□□ 0.67
SALL1Q9NSC2 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.21■□□□□ 0.67
SALL1Q9NSC2 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SALL1Q9NSC2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SALL1Q9NSC2 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
SALL1Q9NSC2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SALL1Q9NSC2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SALL1Q9NSC2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.21■□□□□ 0.67
SALL1Q9NSC2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
SALL1Q9NSC2 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SALL1Q9NSC2 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SALL1Q9NSC2 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SALL1Q9NSC2 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SALL1Q9NSC2 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.21■□□□□ 0.67
SALL1Q9NSC2 AL603832.2-201ENST00000566195 2125 ntBASIC19.21■□□□□ 0.67
SALL1Q9NSC2 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.21■□□□□ 0.67
SALL1Q9NSC2 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SALL1Q9NSC2 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SALL1Q9NSC2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SALL1Q9NSC2 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SALL1Q9NSC2 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SALL1Q9NSC2 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC19.21■□□□□ 0.67
SALL1Q9NSC2 MIR648-201ENST00000385046 94 ntBASIC19.21■□□□□ 0.67
SALL1Q9NSC2 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SALL1Q9NSC2 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.21■□□□□ 0.67
SALL1Q9NSC2 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC19.21■□□□□ 0.67
SALL1Q9NSC2 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC19.21■□□□□ 0.67
SALL1Q9NSC2 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.21■□□□□ 0.67
SALL1Q9NSC2 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC19.21■□□□□ 0.67
SALL1Q9NSC2 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC19.21■□□□□ 0.67
SALL1Q9NSC2 AC106886.1-201ENST00000568660 600 ntBASIC19.21■□□□□ 0.67
SALL1Q9NSC2 AL450472.2-201ENST00000603663 1156 ntBASIC19.21■□□□□ 0.67
SALL1Q9NSC2 AC097359.3-201ENST00000603982 1210 ntBASIC19.21■□□□□ 0.67
SALL1Q9NSC2 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC19.21■□□□□ 0.67
SALL1Q9NSC2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SALL1Q9NSC2 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.21■□□□□ 0.66
SALL1Q9NSC2 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
SALL1Q9NSC2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SALL1Q9NSC2 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SALL1Q9NSC2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.2■□□□□ 0.66
SALL1Q9NSC2 AC024909.3-201ENST00000611513 2257 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms