Protein–RNA interactions for Protein: Q9HCJ2

LRRC4C, Leucine-rich repeat-containing protein 4C, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4CQ9HCJ2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.57■□□□□ 0.24
LRRC4CQ9HCJ2 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC4CQ9HCJ2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC4CQ9HCJ2 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.57■□□□□ 0.24
LRRC4CQ9HCJ2 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.57■□□□□ 0.24
LRRC4CQ9HCJ2 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC4CQ9HCJ2 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC4CQ9HCJ2 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC4CQ9HCJ2 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LRRC4CQ9HCJ2 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC4CQ9HCJ2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.57■□□□□ 0.24
LRRC4CQ9HCJ2 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC4CQ9HCJ2 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC4CQ9HCJ2 AC090616.6-203ENST00000579186 1945 ntBASIC16.57■□□□□ 0.24
LRRC4CQ9HCJ2 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LRRC4CQ9HCJ2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 AC092127.1-201ENST00000567093 3455 ntBASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 OR7E14P-202ENST00000530490 1290 ntBASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 MIR3687-2-201ENST00000577708 61 ntBASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 MIR4515-201ENST00000584082 81 ntBASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 MIR3687-1-201ENST00000614492 61 ntBASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 AC112693.3-201ENST00000624819 1983 ntBASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC4CQ9HCJ2 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 AL359258.3-201ENST00000622910 2331 ntBASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 RNU1-129P-201ENST00000384064 167 ntBASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 HTR5BP-201ENST00000430851 1154 ntBASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 U1.21-201ENST00000580816 167 ntBASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 ACTL9-202ENST00000612068 1252 ntBASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC4CQ9HCJ2 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms