Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 AL691432.1-201ENST00000596308 1422 ntBASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB1Q9H4B7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 RPL13AP23-201ENST00000480739 586 ntBASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 AC098859.1-201ENST00000502915 1238 ntBASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 MIR4313-201ENST00000580760 101 ntBASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 AC092865.6-201ENST00000642101 219 ntBASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 LINC02228-204ENST00000642115 2962 ntBASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 AC091951.1-201ENST00000512854 2465 ntBASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TUBB1Q9H4B7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.48■□□□□ 0.07
TUBB1Q9H4B7 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBB1Q9H4B7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBB1Q9H4B7 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TUBB1Q9H4B7 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.48■□□□□ 0.07
TUBB1Q9H4B7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBB1Q9H4B7 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBB1Q9H4B7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.48■□□□□ 0.07
TUBB1Q9H4B7 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TUBB1Q9H4B7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBB1Q9H4B7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBB1Q9H4B7 C18orf15-201ENST00000623680 2534 ntBASIC15.48■□□□□ 0.07
TUBB1Q9H4B7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.48■□□□□ 0.07
TUBB1Q9H4B7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TUBB1Q9H4B7 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBB1Q9H4B7 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms