Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
HIPK3Q9H422 AC134312.5-201ENST00000568031 1313 ntBASIC17.46■□□□□ 0.38
HIPK3Q9H422 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
HIPK3Q9H422 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
HIPK3Q9H422 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
HIPK3Q9H422 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.45■□□□□ 0.38
HIPK3Q9H422 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
HIPK3Q9H422 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK3Q9H422 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK3Q9H422 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK3Q9H422 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.45■□□□□ 0.38
HIPK3Q9H422 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HIPK3Q9H422 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK3Q9H422 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.45■□□□□ 0.38
HIPK3Q9H422 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK3Q9H422 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HIPK3Q9H422 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK3Q9H422 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK3Q9H422 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK3Q9H422 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.45■□□□□ 0.38
HIPK3Q9H422 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK3Q9H422 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK3Q9H422 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
HIPK3Q9H422 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK3Q9H422 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK3Q9H422 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK3Q9H422 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.45■□□□□ 0.38
HIPK3Q9H422 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.45■□□□□ 0.38
HIPK3Q9H422 TOMM22P5-201ENST00000416399 439 ntBASIC17.45■□□□□ 0.38
HIPK3Q9H422 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.45■□□□□ 0.38
HIPK3Q9H422 AC012441.1-201ENST00000446669 685 ntBASIC17.45■□□□□ 0.38
HIPK3Q9H422 RPL13AP20-201ENST00000459725 609 ntBASIC17.45■□□□□ 0.38
HIPK3Q9H422 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK3Q9H422 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK3Q9H422 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.45■□□□□ 0.38
HIPK3Q9H422 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.45■□□□□ 0.38
HIPK3Q9H422 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.45■□□□□ 0.38
HIPK3Q9H422 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.45■□□□□ 0.38
HIPK3Q9H422 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.45■□□□□ 0.38
HIPK3Q9H422 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.45■□□□□ 0.38
HIPK3Q9H422 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK3Q9H422 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK3Q9H422 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
HIPK3Q9H422 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HIPK3Q9H422 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK3Q9H422 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.44■□□□□ 0.38
HIPK3Q9H422 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK3Q9H422 MSTO2P-201ENST00000314835 1709 ntBASIC17.44■□□□□ 0.38
HIPK3Q9H422 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.44■□□□□ 0.38
HIPK3Q9H422 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
HIPK3Q9H422 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK3Q9H422 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK3Q9H422 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK3Q9H422 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK3Q9H422 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.44■□□□□ 0.38
HIPK3Q9H422 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK3Q9H422 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.44■□□□□ 0.38
HIPK3Q9H422 AC026954.1-201ENST00000429771 1293 ntBASIC17.44■□□□□ 0.38
HIPK3Q9H422 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK3Q9H422 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.44■□□□□ 0.38
HIPK3Q9H422 VDAC1P7-201ENST00000462417 847 ntBASIC17.44■□□□□ 0.38
HIPK3Q9H422 AC106760.1-201ENST00000508690 800 ntBASIC17.44■□□□□ 0.38
HIPK3Q9H422 RN7SL560P-201ENST00000577943 264 ntBASIC17.44■□□□□ 0.38
HIPK3Q9H422 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK3Q9H422 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK3Q9H422 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK3Q9H422 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.44■□□□□ 0.38
HIPK3Q9H422 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK3Q9H422 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK3Q9H422 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
HIPK3Q9H422 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.44■□□□□ 0.38
HIPK3Q9H422 PKD1P1-201ENST00000458669 6805 ntBASIC17.44■□□□□ 0.38
HIPK3Q9H422 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK3Q9H422 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.44■□□□□ 0.38
HIPK3Q9H422 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
HIPK3Q9H422 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HIPK3Q9H422 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIPK3Q9H422 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HIPK3Q9H422 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIPK3Q9H422 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIPK3Q9H422 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HIPK3Q9H422 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.43■□□□□ 0.38
HIPK3Q9H422 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HIPK3Q9H422 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HIPK3Q9H422 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
HIPK3Q9H422 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIPK3Q9H422 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
HIPK3Q9H422 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HIPK3Q9H422 KRT18P64-201ENST00000434946 1219 ntBASIC17.43■□□□□ 0.38
HIPK3Q9H422 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.43■□□□□ 0.38
HIPK3Q9H422 AC245100.5-201ENST00000452108 331 ntBASIC17.43■□□□□ 0.38
HIPK3Q9H422 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.43■□□□□ 0.38
HIPK3Q9H422 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.43■□□□□ 0.38
HIPK3Q9H422 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.43■□□□□ 0.38
HIPK3Q9H422 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.43■□□□□ 0.38
HIPK3Q9H422 AP001063.1-201ENST00000568332 529 ntBASIC17.43■□□□□ 0.38
HIPK3Q9H422 AC091271.1-201ENST00000611877 1162 ntBASIC17.43■□□□□ 0.38
HIPK3Q9H422 AC244669.2-201ENST00000612320 853 ntBASIC17.43■□□□□ 0.38
HIPK3Q9H422 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.43■□□□□ 0.38
HIPK3Q9H422 RHOXF1P1-202ENST00000635473 501 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms