Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AC011491.1-203ENST00000637688 543 ntBASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
CNTNAP3Q9BZ76 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 FAU-202ENST00000434372 533 ntTSL 2 BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 AL359711.2-201ENST00000563105 872 ntBASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 AL451050.2-201ENST00000606967 682 ntBASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNTNAP3Q9BZ76 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 AC108860.2-201ENST00000562760 2183 ntBASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 KRT8P37-201ENST00000451609 1420 ntBASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 AL512430.1-201ENST00000392575 860 ntBASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 AC125604.1-201ENST00000496255 707 ntBASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 RNF146-211ENST00000609447 607 ntTSL 4 BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 AP000346.4-201ENST00000614827 381 ntBASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CNTNAP3Q9BZ76 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.27■□□□□ 0.04
CNTNAP3Q9BZ76 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CNTNAP3Q9BZ76 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.27■□□□□ 0.04
CNTNAP3Q9BZ76 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNTNAP3Q9BZ76 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.27■□□□□ 0.04
CNTNAP3Q9BZ76 AC073439.1-201ENST00000624121 1774 ntBASIC15.27■□□□□ 0.04
CNTNAP3Q9BZ76 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNTNAP3Q9BZ76 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CNTNAP3Q9BZ76 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.27■□□□□ 0.04
CNTNAP3Q9BZ76 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.27■□□□□ 0.04
CNTNAP3Q9BZ76 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms