Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 CENPM-206ENST00000407253 818 ntTSL 2 BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 KRT18P64-201ENST00000434946 1219 ntBASIC19.38■□□□□ 0.69
SALL3Q9BXA9 RPL13P2-201ENST00000440687 659 ntBASIC19.38■□□□□ 0.69
SALL3Q9BXA9 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 AC097493.3-201ENST00000509725 367 ntBASIC19.38■□□□□ 0.69
SALL3Q9BXA9 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 AL390955.2-201ENST00000603032 514 ntBASIC19.38■□□□□ 0.69
SALL3Q9BXA9 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 AC107890.1-201ENST00000422478 521 ntBASIC19.37■□□□□ 0.69
SALL3Q9BXA9 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 ZNF890P-202ENST00000530367 1156 ntBASIC19.37■□□□□ 0.69
SALL3Q9BXA9 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 AC004449.1-201ENST00000564240 433 ntBASIC19.37■□□□□ 0.69
SALL3Q9BXA9 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.37■□□□□ 0.69
SALL3Q9BXA9 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC19.36■□□□□ 0.69
SALL3Q9BXA9 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL3Q9BXA9 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.36■□□□□ 0.69
SALL3Q9BXA9 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SALL3Q9BXA9 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SALL3Q9BXA9 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL3Q9BXA9 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SALL3Q9BXA9 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SALL3Q9BXA9 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.36■□□□□ 0.69
SALL3Q9BXA9 TREML5P-201ENST00000421694 576 ntBASIC19.36■□□□□ 0.69
SALL3Q9BXA9 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.36■□□□□ 0.69
SALL3Q9BXA9 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.36■□□□□ 0.69
SALL3Q9BXA9 AC069120.2-201ENST00000524091 540 ntBASIC19.36■□□□□ 0.69
SALL3Q9BXA9 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SALL3Q9BXA9 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.36■□□□□ 0.69
SALL3Q9BXA9 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC19.36■□□□□ 0.69
SALL3Q9BXA9 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.36■□□□□ 0.69
SALL3Q9BXA9 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SALL3Q9BXA9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL3Q9BXA9 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.36■□□□□ 0.69
SALL3Q9BXA9 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC19.36■□□□□ 0.69
SALL3Q9BXA9 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL3Q9BXA9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SALL3Q9BXA9 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL3Q9BXA9 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC19.36■□□□□ 0.69
SALL3Q9BXA9 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL3Q9BXA9 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL3Q9BXA9 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SALL3Q9BXA9 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SALL3Q9BXA9 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC19.36■□□□□ 0.69
SALL3Q9BXA9 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SALL3Q9BXA9 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms