Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 TFAMP1-201ENST00000412727 736 ntBASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 KRT8P48-201ENST00000515599 1220 ntBASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 AC105233.2-201ENST00000523697 349 ntBASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 AF228730.5-201ENST00000530288 346 ntBASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 LINC01225-203ENST00000563550 1244 ntBASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 AC091951.1-201ENST00000512854 2465 ntBASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 AC112693.3-201ENST00000624819 1983 ntBASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
HERPUD2Q9BSE4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.64■□□□□ 0.26
HERPUD2Q9BSE4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 AL671277.1-201ENST00000429656 993 ntBASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 FAM58CP-201ENST00000435741 640 ntBASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 SPCS2P4-201ENST00000436160 681 ntBASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
HERPUD2Q9BSE4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 AC112482.1-201ENST00000492080 688 ntBASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 C20orf181-201ENST00000623918 480 ntBASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 AC008267.7-201ENST00000624570 1194 ntBASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERPUD2Q9BSE4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms