Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.67■□□□□ 0.58
SLF1Q9BQI6 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLF1Q9BQI6 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLF1Q9BQI6 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLF1Q9BQI6 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLF1Q9BQI6 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLF1Q9BQI6 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLF1Q9BQI6 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLF1Q9BQI6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLF1Q9BQI6 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLF1Q9BQI6 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.67■□□□□ 0.58
SLF1Q9BQI6 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.67■□□□□ 0.58
SLF1Q9BQI6 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.67■□□□□ 0.58
SLF1Q9BQI6 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.67■□□□□ 0.58
SLF1Q9BQI6 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.67■□□□□ 0.58
SLF1Q9BQI6 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.67■□□□□ 0.58
SLF1Q9BQI6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.67■□□□□ 0.58
SLF1Q9BQI6 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.67■□□□□ 0.58
SLF1Q9BQI6 SRD5A3P1-201ENST00000603021 949 ntBASIC18.67■□□□□ 0.58
SLF1Q9BQI6 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.67■□□□□ 0.58
SLF1Q9BQI6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.67■□□□□ 0.58
SLF1Q9BQI6 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLF1Q9BQI6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLF1Q9BQI6 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SLF1Q9BQI6 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLF1Q9BQI6 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLF1Q9BQI6 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLF1Q9BQI6 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLF1Q9BQI6 CU639417.3-201ENST00000624240 1404 ntBASIC18.66■□□□□ 0.58
SLF1Q9BQI6 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 AL162727.3-201ENST00000635661 2787 ntBASIC18.66■□□□□ 0.58
SLF1Q9BQI6 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 AC087499.6-201ENST00000411576 835 ntBASIC18.66■□□□□ 0.58
SLF1Q9BQI6 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.66■□□□□ 0.58
SLF1Q9BQI6 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 GK-202ENST00000378941 458 ntTSL 3 BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLF1Q9BQI6 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms