Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC18.15■□□□□ 0.5
PTPN18Q99952 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN18Q99952 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN18Q99952 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN18Q99952 AC005915.1-201ENST00000624912 2018 ntBASIC18.15■□□□□ 0.5
PTPN18Q99952 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
PTPN18Q99952 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN18Q99952 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN18Q99952 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN18Q99952 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN18Q99952 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC18.15■□□□□ 0.5
PTPN18Q99952 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC18.15■□□□□ 0.5
PTPN18Q99952 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPN18Q99952 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC18.15■□□□□ 0.5
PTPN18Q99952 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPN18Q99952 RN7SL769P-201ENST00000469386 295 ntBASIC18.15■□□□□ 0.5
PTPN18Q99952 RNA5SP486-201ENST00000515961 83 ntBASIC18.15■□□□□ 0.5
PTPN18Q99952 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN18Q99952 AC006453.4-201ENST00000636949 1252 ntBASIC18.15■□□□□ 0.5
PTPN18Q99952 RNF216P1-203ENST00000404404 2427 ntBASIC18.15■□□□□ 0.5
PTPN18Q99952 HLA-A-202ENST00000376806 1854 ntBASIC18.15■□□□□ 0.5
PTPN18Q99952 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN18Q99952 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC18.15■□□□□ 0.5
PTPN18Q99952 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC18.15■□□□□ 0.5
PTPN18Q99952 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN18Q99952 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN18Q99952 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN18Q99952 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PTPN18Q99952 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN18Q99952 AC007613.1-201ENST00000572811 2597 ntBASIC18.15■□□□□ 0.5
PTPN18Q99952 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPN18Q99952 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPN18Q99952 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN18Q99952 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN18Q99952 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN18Q99952 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPN18Q99952 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN18Q99952 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PTPN18Q99952 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
PTPN18Q99952 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PTPN18Q99952 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PTPN18Q99952 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PTPN18Q99952 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.14■□□□□ 0.5
PTPN18Q99952 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PTPN18Q99952 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PTPN18Q99952 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN18Q99952 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.14■□□□□ 0.49
PTPN18Q99952 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN18Q99952 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN18Q99952 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
PTPN18Q99952 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN18Q99952 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN18Q99952 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.14■□□□□ 0.49
PTPN18Q99952 GAPDHP40-201ENST00000505218 1006 ntBASIC18.14■□□□□ 0.49
PTPN18Q99952 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PTPN18Q99952 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN18Q99952 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
PTPN18Q99952 ETV2-208ENST00000621247 941 ntTSL 5 BASIC18.14■□□□□ 0.49
PTPN18Q99952 AC138627.1-207ENST00000641560 1006 ntBASIC18.14■□□□□ 0.49
PTPN18Q99952 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PTPN18Q99952 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN18Q99952 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN18Q99952 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN18Q99952 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.14■□□□□ 0.49
PTPN18Q99952 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN18Q99952 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN18Q99952 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN18Q99952 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN18Q99952 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN18Q99952 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.13■□□□□ 0.49
PTPN18Q99952 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN18Q99952 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN18Q99952 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN18Q99952 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN18Q99952 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN18Q99952 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN18Q99952 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN18Q99952 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PTPN18Q99952 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN18Q99952 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PTPN18Q99952 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN18Q99952 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN18Q99952 CSH2-202ENST00000345366 598 ntTSL 5 BASIC18.13■□□□□ 0.49
PTPN18Q99952 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC18.13■□□□□ 0.49
PTPN18Q99952 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
PTPN18Q99952 APOA2-204ENST00000464492 530 ntTSL 3 BASIC18.13■□□□□ 0.49
PTPN18Q99952 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.13■□□□□ 0.49
PTPN18Q99952 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN18Q99952 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN18Q99952 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN18Q99952 U62317.3-201ENST00000608319 855 ntBASIC18.13■□□□□ 0.49
PTPN18Q99952 AC097724.1-201ENST00000609581 426 ntBASIC18.13■□□□□ 0.49
PTPN18Q99952 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN18Q99952 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN18Q99952 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN18Q99952 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PTPN18Q99952 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN18Q99952 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN18Q99952 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN18Q99952 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms