Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EYA3Q99504 AC120045.2-201ENST00000567334 178 ntBASIC19.38■□□□□ 0.69
EYA3Q99504 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC19.38■□□□□ 0.69
EYA3Q99504 AL606495.2-201ENST00000605867 535 ntBASIC19.38■□□□□ 0.69
EYA3Q99504 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EYA3Q99504 MIR6869-201ENST00000619434 62 ntBASIC19.38■□□□□ 0.69
EYA3Q99504 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
EYA3Q99504 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC19.38■□□□□ 0.69
EYA3Q99504 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
EYA3Q99504 OR6D1P-203ENST00000641209 4860 ntBASIC19.38■□□□□ 0.69
EYA3Q99504 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EYA3Q99504 UBALD1-205ENST00000590891 2641 ntBASIC19.38■□□□□ 0.69
EYA3Q99504 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EYA3Q99504 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.37■□□□□ 0.69
EYA3Q99504 AC009053.2-201ENST00000563701 2365 ntBASIC19.37■□□□□ 0.69
EYA3Q99504 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EYA3Q99504 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.37■□□□□ 0.69
EYA3Q99504 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
EYA3Q99504 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EYA3Q99504 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC19.37■□□□□ 0.69
EYA3Q99504 TP73-213ENST00000604479 1623 ntTSL 5 BASIC19.37■□□□□ 0.69
EYA3Q99504 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
EYA3Q99504 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC19.37■□□□□ 0.69
EYA3Q99504 AP001282.1-201ENST00000531301 1499 ntBASIC19.37■□□□□ 0.69
EYA3Q99504 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
EYA3Q99504 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
EYA3Q99504 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EYA3Q99504 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EYA3Q99504 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
EYA3Q99504 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
EYA3Q99504 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
EYA3Q99504 KRT18P64-201ENST00000434946 1219 ntBASIC19.37■□□□□ 0.69
EYA3Q99504 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC19.37■□□□□ 0.69
EYA3Q99504 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC19.37■□□□□ 0.69
EYA3Q99504 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC19.37■□□□□ 0.69
EYA3Q99504 PHKG1P2-201ENST00000457537 863 ntBASIC19.37■□□□□ 0.69
EYA3Q99504 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC19.37■□□□□ 0.69
EYA3Q99504 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC19.37■□□□□ 0.69
EYA3Q99504 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC19.37■□□□□ 0.69
EYA3Q99504 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
EYA3Q99504 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC19.37■□□□□ 0.69
EYA3Q99504 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
EYA3Q99504 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
EYA3Q99504 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EYA3Q99504 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.37■□□□□ 0.69
EYA3Q99504 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EYA3Q99504 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EYA3Q99504 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
EYA3Q99504 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
EYA3Q99504 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
EYA3Q99504 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EYA3Q99504 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.36■□□□□ 0.69
EYA3Q99504 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EYA3Q99504 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EYA3Q99504 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.36■□□□□ 0.69
EYA3Q99504 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EYA3Q99504 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
EYA3Q99504 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
EYA3Q99504 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.36■□□□□ 0.69
EYA3Q99504 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EYA3Q99504 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
EYA3Q99504 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
EYA3Q99504 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC19.36■□□□□ 0.69
EYA3Q99504 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EYA3Q99504 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
EYA3Q99504 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EYA3Q99504 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EYA3Q99504 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EYA3Q99504 BAATP1-201ENST00000412284 1225 ntBASIC19.36■□□□□ 0.69
EYA3Q99504 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC19.36■□□□□ 0.69
EYA3Q99504 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC19.36■□□□□ 0.69
EYA3Q99504 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC19.36■□□□□ 0.69
EYA3Q99504 AC007551.1-201ENST00000457394 519 ntBASIC19.36■□□□□ 0.69
EYA3Q99504 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC19.36■□□□□ 0.69
EYA3Q99504 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EYA3Q99504 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC19.36■□□□□ 0.69
EYA3Q99504 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC19.36■□□□□ 0.69
EYA3Q99504 AP000812.2-201ENST00000538934 718 ntBASIC19.36■□□□□ 0.69
EYA3Q99504 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC19.36■□□□□ 0.69
EYA3Q99504 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EYA3Q99504 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EYA3Q99504 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EYA3Q99504 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.36■□□□□ 0.69
EYA3Q99504 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
EYA3Q99504 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EYA3Q99504 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
EYA3Q99504 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
EYA3Q99504 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.35■□□□□ 0.69
EYA3Q99504 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
EYA3Q99504 AC106886.4-201ENST00000623557 2502 ntBASIC19.35■□□□□ 0.69
EYA3Q99504 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC19.35■□□□□ 0.69
EYA3Q99504 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
EYA3Q99504 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
EYA3Q99504 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
EYA3Q99504 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
EYA3Q99504 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC19.35■□□□□ 0.69
EYA3Q99504 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC19.35■□□□□ 0.69
EYA3Q99504 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.35■□□□□ 0.69
EYA3Q99504 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
EYA3Q99504 VDAC1P7-201ENST00000462417 847 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms