Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB40CQ96S21 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.11□□□□□ -0.31
RAB40CQ96S21 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAB40CQ96S21 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
RAB40CQ96S21 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB40CQ96S21 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB40CQ96S21 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB40CQ96S21 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB40CQ96S21 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.1□□□□□ -0.31
RAB40CQ96S21 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.1□□□□□ -0.31
RAB40CQ96S21 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB40CQ96S21 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB40CQ96S21 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB40CQ96S21 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
RAB40CQ96S21 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB40CQ96S21 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RAB40CQ96S21 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.1□□□□□ -0.31
RAB40CQ96S21 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.1□□□□□ -0.31
RAB40CQ96S21 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB40CQ96S21 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB40CQ96S21 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB40CQ96S21 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB40CQ96S21 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB40CQ96S21 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
RAB40CQ96S21 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB40CQ96S21 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
RAB40CQ96S21 PTCHD3P3-201ENST00000403073 906 ntBASIC13.1□□□□□ -0.31
RAB40CQ96S21 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB40CQ96S21 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.1□□□□□ -0.31
RAB40CQ96S21 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.1□□□□□ -0.31
RAB40CQ96S21 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.1□□□□□ -0.31
RAB40CQ96S21 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.1□□□□□ -0.31
RAB40CQ96S21 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB40CQ96S21 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.1□□□□□ -0.31
RAB40CQ96S21 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB40CQ96S21 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
RAB40CQ96S21 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB40CQ96S21 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.1□□□□□ -0.31
RAB40CQ96S21 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB40CQ96S21 AL591684.3-201ENST00000605187 298 ntBASIC13.1□□□□□ -0.31
RAB40CQ96S21 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.1□□□□□ -0.31
RAB40CQ96S21 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB40CQ96S21 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB40CQ96S21 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.1□□□□□ -0.31
RAB40CQ96S21 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.1□□□□□ -0.31
RAB40CQ96S21 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB40CQ96S21 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB40CQ96S21 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB40CQ96S21 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.1□□□□□ -0.31
RAB40CQ96S21 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB40CQ96S21 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.1□□□□□ -0.31
RAB40CQ96S21 AC067750.1-201ENST00000608826 6545 ntBASIC13.1□□□□□ -0.31
RAB40CQ96S21 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.1□□□□□ -0.31
RAB40CQ96S21 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.1□□□□□ -0.31
RAB40CQ96S21 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.1□□□□□ -0.31
RAB40CQ96S21 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB40CQ96S21 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.1□□□□□ -0.31
RAB40CQ96S21 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RAB40CQ96S21 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB40CQ96S21 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB40CQ96S21 CICP24-201ENST00000605464 2705 ntBASIC13.1□□□□□ -0.31
RAB40CQ96S21 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB40CQ96S21 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB40CQ96S21 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.1□□□□□ -0.31
RAB40CQ96S21 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB40CQ96S21 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.1□□□□□ -0.31
RAB40CQ96S21 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.09□□□□□ -0.31
RAB40CQ96S21 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB40CQ96S21 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.09□□□□□ -0.31
RAB40CQ96S21 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.09□□□□□ -0.31
RAB40CQ96S21 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB40CQ96S21 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
RAB40CQ96S21 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB40CQ96S21 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB40CQ96S21 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB40CQ96S21 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB40CQ96S21 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB40CQ96S21 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
RAB40CQ96S21 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.09□□□□□ -0.31
RAB40CQ96S21 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB40CQ96S21 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RAB40CQ96S21 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB40CQ96S21 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RAB40CQ96S21 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.09□□□□□ -0.31
RAB40CQ96S21 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB40CQ96S21 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RAB40CQ96S21 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB40CQ96S21 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB40CQ96S21 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.09□□□□□ -0.31
RAB40CQ96S21 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.09□□□□□ -0.31
RAB40CQ96S21 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB40CQ96S21 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB40CQ96S21 AC245100.5-201ENST00000452108 331 ntBASIC13.09□□□□□ -0.31
RAB40CQ96S21 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.09□□□□□ -0.31
RAB40CQ96S21 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB40CQ96S21 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.09□□□□□ -0.31
RAB40CQ96S21 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.09□□□□□ -0.31
RAB40CQ96S21 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.09□□□□□ -0.31
RAB40CQ96S21 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RAB40CQ96S21 AC099336.1-202ENST00000602961 463 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms