Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BBS4Q96RK4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBS4Q96RK4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBS4Q96RK4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
BBS4Q96RK4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.3■□□□□ 0.04
BBS4Q96RK4 PRAL-201ENST00000624952 3286 ntBASIC15.3■□□□□ 0.04
BBS4Q96RK4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS4Q96RK4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS4Q96RK4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS4Q96RK4 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS4Q96RK4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS4Q96RK4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.3■□□□□ 0.04
BBS4Q96RK4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
BBS4Q96RK4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
BBS4Q96RK4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.3■□□□□ 0.04
BBS4Q96RK4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS4Q96RK4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS4Q96RK4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BBS4Q96RK4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS4Q96RK4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BBS4Q96RK4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.3■□□□□ 0.04
BBS4Q96RK4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.3■□□□□ 0.04
BBS4Q96RK4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.3■□□□□ 0.04
BBS4Q96RK4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.3■□□□□ 0.04
BBS4Q96RK4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.3■□□□□ 0.04
BBS4Q96RK4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.3■□□□□ 0.04
BBS4Q96RK4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.3■□□□□ 0.04
BBS4Q96RK4 HTR5BP-201ENST00000430851 1154 ntBASIC15.3■□□□□ 0.04
BBS4Q96RK4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
BBS4Q96RK4 TIMM8BP1-201ENST00000452384 211 ntBASIC15.3■□□□□ 0.04
BBS4Q96RK4 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.3■□□□□ 0.04
BBS4Q96RK4 IGHV3-62-201ENST00000520057 340 ntBASIC15.3■□□□□ 0.04
BBS4Q96RK4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.3■□□□□ 0.04
BBS4Q96RK4 AC024267.1-201ENST00000582320 895 ntBASIC15.3■□□□□ 0.04
BBS4Q96RK4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.3■□□□□ 0.04
BBS4Q96RK4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.3■□□□□ 0.04
BBS4Q96RK4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
BBS4Q96RK4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.3■□□□□ 0.04
BBS4Q96RK4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS4Q96RK4 AP003680.1-201ENST00000598970 3660 ntBASIC15.3■□□□□ 0.04
BBS4Q96RK4 AC026120.1-201ENST00000611536 926 ntBASIC15.3■□□□□ 0.04
BBS4Q96RK4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
BBS4Q96RK4 AC132872.4-202ENST00000622924 2756 ntBASIC15.3■□□□□ 0.04
BBS4Q96RK4 AC112504.1-201ENST00000623415 1841 ntBASIC15.3■□□□□ 0.04
BBS4Q96RK4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.3■□□□□ 0.04
BBS4Q96RK4 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS4Q96RK4 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
BBS4Q96RK4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS4Q96RK4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS4Q96RK4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BBS4Q96RK4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.3■□□□□ 0.04
BBS4Q96RK4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS4Q96RK4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS4Q96RK4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS4Q96RK4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS4Q96RK4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.29■□□□□ 0.04
BBS4Q96RK4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BBS4Q96RK4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS4Q96RK4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.29■□□□□ 0.04
BBS4Q96RK4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.29■□□□□ 0.04
BBS4Q96RK4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.29■□□□□ 0.04
BBS4Q96RK4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BBS4Q96RK4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.29■□□□□ 0.04
BBS4Q96RK4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS4Q96RK4 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS4Q96RK4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BBS4Q96RK4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.29■□□□□ 0.04
BBS4Q96RK4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS4Q96RK4 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS4Q96RK4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS4Q96RK4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.29■□□□□ 0.04
BBS4Q96RK4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS4Q96RK4 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS4Q96RK4 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS4Q96RK4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS4Q96RK4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.29■□□□□ 0.04
BBS4Q96RK4 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS4Q96RK4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS4Q96RK4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS4Q96RK4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.29■□□□□ 0.04
BBS4Q96RK4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.29■□□□□ 0.04
BBS4Q96RK4 MKNK2P1-201ENST00000437526 628 ntBASIC15.29■□□□□ 0.04
BBS4Q96RK4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.29■□□□□ 0.04
BBS4Q96RK4 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.29■□□□□ 0.04
BBS4Q96RK4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
BBS4Q96RK4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
BBS4Q96RK4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.29■□□□□ 0.04
BBS4Q96RK4 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
BBS4Q96RK4 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.29■□□□□ 0.04
BBS4Q96RK4 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.29■□□□□ 0.04
BBS4Q96RK4 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS4Q96RK4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BBS4Q96RK4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.29■□□□□ 0.04
BBS4Q96RK4 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS4Q96RK4 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BBS4Q96RK4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS4Q96RK4 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS4Q96RK4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.29■□□□□ 0.04
BBS4Q96RK4 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS4Q96RK4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms