Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 REXO1L1P-202ENST00000608646 1974 ntBASIC13.35□□□□□ -0.27
GAFA1Q96PS6 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.35□□□□□ -0.27
GAFA1Q96PS6 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 AC069120.2-201ENST00000524091 540 ntBASIC13.35□□□□□ -0.27
GAFA1Q96PS6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 AC106028.4-201ENST00000614509 607 ntBASIC13.35□□□□□ -0.27
GAFA1Q96PS6 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.35□□□□□ -0.27
GAFA1Q96PS6 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 AC008894.3-201ENST00000624324 3103 ntBASIC13.35□□□□□ -0.27
GAFA1Q96PS6 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 KRT8P12-202ENST00000472924 1397 ntBASIC13.34□□□□□ -0.27
GAFA1Q96PS6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 AL080243.2-201ENST00000418783 582 ntBASIC13.34□□□□□ -0.27
GAFA1Q96PS6 TREML5P-201ENST00000421694 576 ntBASIC13.34□□□□□ -0.27
GAFA1Q96PS6 HLA-V-204ENST00000476601 1289 ntBASIC13.34□□□□□ -0.27
GAFA1Q96PS6 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 AL138828.2-201ENST00000615812 383 ntBASIC13.34□□□□□ -0.27
GAFA1Q96PS6 AC073592.8-201ENST00000624126 511 ntBASIC13.34□□□□□ -0.27
GAFA1Q96PS6 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
GAFA1Q96PS6 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
GAFA1Q96PS6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.33□□□□□ -0.27
GAFA1Q96PS6 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.33□□□□□ -0.27
GAFA1Q96PS6 FO538757.1-201ENST00000623083 1397 ntBASIC13.33□□□□□ -0.27
GAFA1Q96PS6 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
GAFA1Q96PS6 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
GAFA1Q96PS6 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
GAFA1Q96PS6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.33□□□□□ -0.28
GAFA1Q96PS6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GAFA1Q96PS6 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GAFA1Q96PS6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
GAFA1Q96PS6 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GAFA1Q96PS6 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
GAFA1Q96PS6 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GAFA1Q96PS6 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
GAFA1Q96PS6 RPL37AP1-201ENST00000412502 279 ntBASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms