Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 SPDYE19P-201ENST00000338590 713 ntBASIC13.09□□□□□ -0.31
ZNF48Q96MX3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 KRT17P7-201ENST00000451704 1104 ntBASIC13.09□□□□□ -0.31
ZNF48Q96MX3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 AL008721.1-201ENST00000609964 604 ntBASIC13.09□□□□□ -0.31
ZNF48Q96MX3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 CU639417.3-201ENST00000624240 1404 ntBASIC13.09□□□□□ -0.31
ZNF48Q96MX3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.09□□□□□ -0.31
ZNF48Q96MX3 GGT3P-204ENST00000453783 1664 ntBASIC13.08□□□□□ -0.31
ZNF48Q96MX3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.08□□□□□ -0.31
ZNF48Q96MX3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ZNF48Q96MX3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.31
ZNF48Q96MX3 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.08□□□□□ -0.31
ZNF48Q96MX3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.08□□□□□ -0.31
ZNF48Q96MX3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.31
ZNF48Q96MX3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
ZNF48Q96MX3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.08□□□□□ -0.31
ZNF48Q96MX3 AC092171.3-201ENST00000610122 2651 ntBASIC13.08□□□□□ -0.31
ZNF48Q96MX3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 DGCR5-201ENST00000399539 862 ntBASIC13.08□□□□□ -0.32
ZNF48Q96MX3 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms