Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ALPK3Q96L96 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ALPK3Q96L96 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ALPK3Q96L96 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ALPK3Q96L96 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ALPK3Q96L96 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.14■□□□□ 0.33
ALPK3Q96L96 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.14■□□□□ 0.33
ALPK3Q96L96 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ALPK3Q96L96 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ALPK3Q96L96 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ALPK3Q96L96 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALPK3Q96L96 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALPK3Q96L96 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALPK3Q96L96 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC17.13■□□□□ 0.33
ALPK3Q96L96 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ALPK3Q96L96 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.13■□□□□ 0.33
ALPK3Q96L96 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.13■□□□□ 0.33
ALPK3Q96L96 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ALPK3Q96L96 FAM8A4P-201ENST00000435433 1213 ntBASIC17.13■□□□□ 0.33
ALPK3Q96L96 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.13■□□□□ 0.33
ALPK3Q96L96 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ALPK3Q96L96 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.13■□□□□ 0.33
ALPK3Q96L96 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC17.13■□□□□ 0.33
ALPK3Q96L96 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.13■□□□□ 0.33
ALPK3Q96L96 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.13■□□□□ 0.33
ALPK3Q96L96 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ALPK3Q96L96 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.13■□□□□ 0.33
ALPK3Q96L96 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ALPK3Q96L96 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALPK3Q96L96 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.13■□□□□ 0.33
ALPK3Q96L96 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ALPK3Q96L96 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
ALPK3Q96L96 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALPK3Q96L96 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ALPK3Q96L96 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ALPK3Q96L96 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALPK3Q96L96 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
ALPK3Q96L96 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALPK3Q96L96 RPSAP31-201ENST00000416648 895 ntBASIC17.13■□□□□ 0.33
ALPK3Q96L96 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.13■□□□□ 0.33
ALPK3Q96L96 AL592424.1-201ENST00000563624 1536 ntBASIC17.13■□□□□ 0.33
ALPK3Q96L96 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.13■□□□□ 0.33
ALPK3Q96L96 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALPK3Q96L96 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALPK3Q96L96 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ALPK3Q96L96 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.13■□□□□ 0.33
ALPK3Q96L96 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.13■□□□□ 0.33
ALPK3Q96L96 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALPK3Q96L96 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ALPK3Q96L96 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALPK3Q96L96 PKD1P6-201ENST00000343738 4769 ntBASIC17.12■□□□□ 0.33
ALPK3Q96L96 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ALPK3Q96L96 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.12■□□□□ 0.33
ALPK3Q96L96 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ALPK3Q96L96 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ALPK3Q96L96 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ALPK3Q96L96 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ALPK3Q96L96 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.12■□□□□ 0.33
ALPK3Q96L96 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALPK3Q96L96 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALPK3Q96L96 AC132192.2-201ENST00000596206 1147 ntBASIC17.12■□□□□ 0.33
ALPK3Q96L96 AL450472.2-201ENST00000603663 1156 ntBASIC17.12■□□□□ 0.33
ALPK3Q96L96 AP005019.2-201ENST00000615104 511 ntBASIC17.12■□□□□ 0.33
ALPK3Q96L96 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALPK3Q96L96 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALPK3Q96L96 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.12■□□□□ 0.33
ALPK3Q96L96 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ALPK3Q96L96 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALPK3Q96L96 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
ALPK3Q96L96 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALPK3Q96L96 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ALPK3Q96L96 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.12■□□□□ 0.33
ALPK3Q96L96 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ALPK3Q96L96 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.12■□□□□ 0.33
ALPK3Q96L96 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALPK3Q96L96 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALPK3Q96L96 RN7SL8P-201ENST00000461771 266 ntBASIC17.11■□□□□ 0.33
ALPK3Q96L96 AC106820.3-201ENST00000561653 397 ntBASIC17.11■□□□□ 0.33
ALPK3Q96L96 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ALPK3Q96L96 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.11■□□□□ 0.33
ALPK3Q96L96 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ALPK3Q96L96 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.11■□□□□ 0.33
ALPK3Q96L96 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.11■□□□□ 0.33
ALPK3Q96L96 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALPK3Q96L96 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.11■□□□□ 0.33
ALPK3Q96L96 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
ALPK3Q96L96 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.11■□□□□ 0.33
ALPK3Q96L96 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALPK3Q96L96 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.11■□□□□ 0.33
ALPK3Q96L96 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
ALPK3Q96L96 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ALPK3Q96L96 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.11■□□□□ 0.33
ALPK3Q96L96 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.11■□□□□ 0.33
ALPK3Q96L96 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALPK3Q96L96 POM121L8P-201ENST00000417732 1281 ntBASIC17.11■□□□□ 0.33
ALPK3Q96L96 POM121L9P-203ENST00000441984 1285 ntBASIC17.11■□□□□ 0.33
ALPK3Q96L96 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.11■□□□□ 0.33
ALPK3Q96L96 HIST2H2BB-201ENST00000449108 381 ntBASIC17.11■□□□□ 0.33
ALPK3Q96L96 GAPDHP40-201ENST00000505218 1006 ntBASIC17.11■□□□□ 0.33
ALPK3Q96L96 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms