Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM54Q969K7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.13□□□□□ -0.15
TMEM54Q969K7 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
TMEM54Q969K7 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.13□□□□□ -0.15
TMEM54Q969K7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TMEM54Q969K7 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM54Q969K7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.12□□□□□ -0.15
TMEM54Q969K7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.12□□□□□ -0.15
TMEM54Q969K7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.12□□□□□ -0.15
TMEM54Q969K7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM54Q969K7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM54Q969K7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM54Q969K7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.12□□□□□ -0.15
TMEM54Q969K7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.12□□□□□ -0.15
TMEM54Q969K7 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
TMEM54Q969K7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
TMEM54Q969K7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM54Q969K7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM54Q969K7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.12□□□□□ -0.15
TMEM54Q969K7 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM54Q969K7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM54Q969K7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM54Q969K7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM54Q969K7 AC018892.3-201ENST00000623986 2499 ntBASIC14.12□□□□□ -0.15
TMEM54Q969K7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM54Q969K7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM54Q969K7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM54Q969K7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.12□□□□□ -0.15
TMEM54Q969K7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
TMEM54Q969K7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.12□□□□□ -0.15
TMEM54Q969K7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.12□□□□□ -0.15
TMEM54Q969K7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.12□□□□□ -0.15
TMEM54Q969K7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.12□□□□□ -0.15
TMEM54Q969K7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.12□□□□□ -0.15
TMEM54Q969K7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.12□□□□□ -0.15
TMEM54Q969K7 AL079307.3-201ENST00000556114 283 ntBASIC14.12□□□□□ -0.15
TMEM54Q969K7 AC004449.1-201ENST00000564240 433 ntBASIC14.12□□□□□ -0.15
TMEM54Q969K7 MIR4313-201ENST00000580760 101 ntBASIC14.12□□□□□ -0.15
TMEM54Q969K7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.12□□□□□ -0.15
TMEM54Q969K7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.12□□□□□ -0.15
TMEM54Q969K7 Z92544.3-201ENST00000624747 417 ntBASIC14.12□□□□□ -0.15
TMEM54Q969K7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.12□□□□□ -0.15
TMEM54Q969K7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM54Q969K7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.12□□□□□ -0.15
TMEM54Q969K7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.12□□□□□ -0.15
TMEM54Q969K7 AC105917.1-201ENST00000506637 2539 ntBASIC14.12□□□□□ -0.15
TMEM54Q969K7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM54Q969K7 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM54Q969K7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TMEM54Q969K7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TMEM54Q969K7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM54Q969K7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM54Q969K7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM54Q969K7 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TMEM54Q969K7 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.11□□□□□ -0.15
TMEM54Q969K7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.11□□□□□ -0.15
TMEM54Q969K7 KRT8P12-202ENST00000472924 1397 ntBASIC14.11□□□□□ -0.15
TMEM54Q969K7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM54Q969K7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM54Q969K7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.11□□□□□ -0.15
TMEM54Q969K7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.11□□□□□ -0.15
TMEM54Q969K7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.11□□□□□ -0.15
TMEM54Q969K7 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TMEM54Q969K7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM54Q969K7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM54Q969K7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.11□□□□□ -0.15
TMEM54Q969K7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM54Q969K7 FO393414.2-201ENST00000405153 598 ntBASIC14.11□□□□□ -0.15
TMEM54Q969K7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TMEM54Q969K7 AZGP1P1-201ENST00000411909 902 ntBASIC14.11□□□□□ -0.15
TMEM54Q969K7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.11□□□□□ -0.15
TMEM54Q969K7 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TMEM54Q969K7 CNN2P2-201ENST00000443536 909 ntBASIC14.11□□□□□ -0.15
TMEM54Q969K7 CNN2P3-201ENST00000450201 906 ntBASIC14.11□□□□□ -0.15
TMEM54Q969K7 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.11□□□□□ -0.15
TMEM54Q969K7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.11□□□□□ -0.15
TMEM54Q969K7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.11□□□□□ -0.15
TMEM54Q969K7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TMEM54Q969K7 AC025678.2-201ENST00000562061 970 ntBASIC14.11□□□□□ -0.15
TMEM54Q969K7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.11□□□□□ -0.15
TMEM54Q969K7 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.11□□□□□ -0.15
TMEM54Q969K7 AL136317.3-201ENST00000618497 906 ntBASIC14.11□□□□□ -0.15
TMEM54Q969K7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.11□□□□□ -0.15
TMEM54Q969K7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TMEM54Q969K7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.11□□□□□ -0.15
TMEM54Q969K7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.11□□□□□ -0.15
TMEM54Q969K7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.11□□□□□ -0.15
TMEM54Q969K7 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM54Q969K7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.11□□□□□ -0.15
TMEM54Q969K7 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.11□□□□□ -0.15
TMEM54Q969K7 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM54Q969K7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM54Q969K7 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.11□□□□□ -0.15
TMEM54Q969K7 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM54Q969K7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM54Q969K7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.11□□□□□ -0.15
TMEM54Q969K7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM54Q969K7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM54Q969K7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TMEM54Q969K7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms