Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HPS1Q92902 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.85□□□□□ -0.03
HPS1Q92902 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.85□□□□□ -0.03
HPS1Q92902 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HPS1Q92902 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HPS1Q92902 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HPS1Q92902 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HPS1Q92902 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HPS1Q92902 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
HPS1Q92902 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.85□□□□□ -0.03
HPS1Q92902 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HPS1Q92902 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HPS1Q92902 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HPS1Q92902 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.85□□□□□ -0.03
HPS1Q92902 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HPS1Q92902 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HPS1Q92902 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HPS1Q92902 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.85□□□□□ -0.03
HPS1Q92902 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HPS1Q92902 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
HPS1Q92902 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HPS1Q92902 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HPS1Q92902 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HPS1Q92902 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HPS1Q92902 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
HPS1Q92902 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.84□□□□□ -0.03
HPS1Q92902 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.84□□□□□ -0.03
HPS1Q92902 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HPS1Q92902 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HPS1Q92902 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HPS1Q92902 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HPS1Q92902 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HPS1Q92902 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HPS1Q92902 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HPS1Q92902 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.84□□□□□ -0.03
HPS1Q92902 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HPS1Q92902 KRT18P13-201ENST00000400056 1290 ntBASIC14.84□□□□□ -0.03
HPS1Q92902 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.84□□□□□ -0.03
HPS1Q92902 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.84□□□□□ -0.03
HPS1Q92902 RPL13AP23-201ENST00000480739 586 ntBASIC14.84□□□□□ -0.03
HPS1Q92902 SLC25A1P1-201ENST00000528351 927 ntBASIC14.84□□□□□ -0.03
HPS1Q92902 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HPS1Q92902 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.84□□□□□ -0.03
HPS1Q92902 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.84□□□□□ -0.03
HPS1Q92902 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.84□□□□□ -0.03
HPS1Q92902 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HPS1Q92902 MIR7706-201ENST00000613747 67 ntBASIC14.84□□□□□ -0.03
HPS1Q92902 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HPS1Q92902 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HPS1Q92902 CICP20-201ENST00000443330 2801 ntBASIC14.84□□□□□ -0.03
HPS1Q92902 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HPS1Q92902 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HPS1Q92902 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HPS1Q92902 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HPS1Q92902 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HPS1Q92902 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HPS1Q92902 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HPS1Q92902 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HPS1Q92902 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HPS1Q92902 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HPS1Q92902 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HPS1Q92902 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HPS1Q92902 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HPS1Q92902 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HPS1Q92902 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HPS1Q92902 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HPS1Q92902 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HPS1Q92902 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HPS1Q92902 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HPS1Q92902 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HPS1Q92902 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
HPS1Q92902 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HPS1Q92902 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HPS1Q92902 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HPS1Q92902 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.83□□□□□ -0.04
HPS1Q92902 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HPS1Q92902 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HPS1Q92902 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
HPS1Q92902 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.83□□□□□ -0.04
HPS1Q92902 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.83□□□□□ -0.04
HPS1Q92902 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HPS1Q92902 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
HPS1Q92902 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HPS1Q92902 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HPS1Q92902 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HPS1Q92902 AC003669.1-201ENST00000334569 611 ntBASIC14.83□□□□□ -0.04
HPS1Q92902 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.83□□□□□ -0.04
HPS1Q92902 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.83□□□□□ -0.04
HPS1Q92902 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
HPS1Q92902 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HPS1Q92902 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.83□□□□□ -0.04
HPS1Q92902 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.83□□□□□ -0.04
HPS1Q92902 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HPS1Q92902 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HPS1Q92902 AC109462.3-201ENST00000573934 613 ntBASIC14.83□□□□□ -0.04
HPS1Q92902 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.83□□□□□ -0.04
HPS1Q92902 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HPS1Q92902 AP005117.1-202ENST00000581724 1908 ntBASIC14.83□□□□□ -0.04
HPS1Q92902 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HPS1Q92902 PMS2P7-201ENST00000506558 1336 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms