Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTCD2Q8WV60 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.37■□□□□ 0.21
PTCD2Q8WV60 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
PTCD2Q8WV60 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTCD2Q8WV60 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTCD2Q8WV60 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PTCD2Q8WV60 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.37■□□□□ 0.21
PTCD2Q8WV60 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PTCD2Q8WV60 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PTCD2Q8WV60 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTCD2Q8WV60 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PTCD2Q8WV60 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTCD2Q8WV60 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PTCD2Q8WV60 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.37■□□□□ 0.21
PTCD2Q8WV60 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.37■□□□□ 0.21
PTCD2Q8WV60 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.37■□□□□ 0.21
PTCD2Q8WV60 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.37■□□□□ 0.21
PTCD2Q8WV60 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.37■□□□□ 0.21
PTCD2Q8WV60 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.37■□□□□ 0.21
PTCD2Q8WV60 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PTCD2Q8WV60 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTCD2Q8WV60 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTCD2Q8WV60 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PTCD2Q8WV60 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.37■□□□□ 0.21
PTCD2Q8WV60 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 UXT-AS1-201ENST00000590504 1525 ntBASIC16.36■□□□□ 0.21
PTCD2Q8WV60 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 KRT18P32-201ENST00000424695 1287 ntBASIC16.36■□□□□ 0.21
PTCD2Q8WV60 HMGN1P19-201ENST00000436976 333 ntBASIC16.36■□□□□ 0.21
PTCD2Q8WV60 AC099542.2-201ENST00000474149 553 ntTSL 2 BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 SLC25A39P2-201ENST00000537614 270 ntBASIC16.36■□□□□ 0.21
PTCD2Q8WV60 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 AC027307.2-201ENST00000591252 911 ntBASIC16.36■□□□□ 0.21
PTCD2Q8WV60 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 AC105917.1-201ENST00000506637 2539 ntBASIC16.36■□□□□ 0.21
PTCD2Q8WV60 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PTCD2Q8WV60 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTCD2Q8WV60 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTCD2Q8WV60 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTCD2Q8WV60 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PTCD2Q8WV60 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.35■□□□□ 0.21
PTCD2Q8WV60 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTCD2Q8WV60 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTCD2Q8WV60 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTCD2Q8WV60 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTCD2Q8WV60 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTCD2Q8WV60 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.35■□□□□ 0.21
PTCD2Q8WV60 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PTCD2Q8WV60 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.35■□□□□ 0.21
PTCD2Q8WV60 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTCD2Q8WV60 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTCD2Q8WV60 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PTCD2Q8WV60 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.35■□□□□ 0.21
PTCD2Q8WV60 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC16.35■□□□□ 0.21
PTCD2Q8WV60 AL645939.2-201ENST00000427340 991 ntBASIC16.35■□□□□ 0.21
PTCD2Q8WV60 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.35■□□□□ 0.21
PTCD2Q8WV60 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms