Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 AL160314.3-201ENST00000556041 767 ntBASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 NPM1P43-201ENST00000558669 786 ntBASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 AC007663.3-201ENST00000609632 465 ntBASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 AP005019.2-201ENST00000615104 511 ntBASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 AC244157.2-201ENST00000616239 1006 ntBASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 AL162426.1-201ENST00000624141 743 ntBASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 AL161670.2-201ENST00000557650 1227 ntBASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 AC135983.4-201ENST00000564116 1262 ntBASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 AC132192.2-201ENST00000596206 1147 ntBASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 ENPP7P14-201ENST00000621765 1040 ntBASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 ACKR1-201ENST00000368121 1240 ntBASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
ALMS1Q8TCU4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 SYT17-208ENST00000568433 812 ntTSL 3 BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 AL353726.2-201ENST00000623259 884 ntBASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 CRCP-204ENST00000398684 492 ntTSL 2 BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 MIR4783-201ENST00000580343 82 ntBASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms