Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NKX2-3Q8TAU0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.92■□□□□ 0.62
NKX2-3Q8TAU0 AC074338.1-201ENST00000416825 156 ntBASIC18.92■□□□□ 0.62
NKX2-3Q8TAU0 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.92■□□□□ 0.62
NKX2-3Q8TAU0 AC022210.1-201ENST00000449856 793 ntBASIC18.92■□□□□ 0.62
NKX2-3Q8TAU0 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.92■□□□□ 0.62
NKX2-3Q8TAU0 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NKX2-3Q8TAU0 FAM8A2P-201ENST00000528813 1142 ntBASIC18.92■□□□□ 0.62
NKX2-3Q8TAU0 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.92■□□□□ 0.62
NKX2-3Q8TAU0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.92■□□□□ 0.62
NKX2-3Q8TAU0 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.92■□□□□ 0.62
NKX2-3Q8TAU0 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
NKX2-3Q8TAU0 AC004840.1-201ENST00000636359 365 ntBASIC18.92■□□□□ 0.62
NKX2-3Q8TAU0 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX2-3Q8TAU0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
NKX2-3Q8TAU0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.92■□□□□ 0.62
NKX2-3Q8TAU0 CETN4P-206ENST00000642099 2168 ntBASIC18.92■□□□□ 0.62
NKX2-3Q8TAU0 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX2-3Q8TAU0 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NKX2-3Q8TAU0 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 PARP8-218ENST00000513738 596 ntTSL 4 BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 AC132938.2-201ENST00000579188 680 ntBASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 MIR4525-201ENST00000580000 75 ntBASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 AL591163.1-201ENST00000641757 987 ntBASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 AC008894.3-201ENST00000624324 3103 ntBASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
NKX2-3Q8TAU0 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 MIR648-201ENST00000385046 94 ntBASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 PAUPAR-201ENST00000630360 2965 ntBASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.9■□□□□ 0.62
NKX2-3Q8TAU0 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.89■□□□□ 0.62
NKX2-3Q8TAU0 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.89■□□□□ 0.62
NKX2-3Q8TAU0 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
NKX2-3Q8TAU0 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
NKX2-3Q8TAU0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.89■□□□□ 0.61
NKX2-3Q8TAU0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
NKX2-3Q8TAU0 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NKX2-3Q8TAU0 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms