Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NUP43Q8NFH3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NUP43Q8NFH3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.07■□□□□ 0
NUP43Q8NFH3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NUP43Q8NFH3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NUP43Q8NFH3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.07■□□□□ 0
NUP43Q8NFH3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NUP43Q8NFH3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.07■□□□□ 0
NUP43Q8NFH3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
NUP43Q8NFH3 HLA-H-201ENST00000383620 1096 ntBASIC15.07■□□□□ 0
NUP43Q8NFH3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.07■□□□□ 0
NUP43Q8NFH3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.07■□□□□ 0
NUP43Q8NFH3 AC069335.1-201ENST00000489972 472 ntBASIC15.07■□□□□ 0
NUP43Q8NFH3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.07■□□□□ 0
NUP43Q8NFH3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.07■□□□□ 0
NUP43Q8NFH3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.07■□□□□ 0
NUP43Q8NFH3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.07■□□□□ 0
NUP43Q8NFH3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.07■□□□□ 0
NUP43Q8NFH3 SLC25A39P2-201ENST00000537614 270 ntBASIC15.07■□□□□ 0
NUP43Q8NFH3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.07■□□□□ 0
NUP43Q8NFH3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.07■□□□□ 0
NUP43Q8NFH3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.07■□□□□ 0
NUP43Q8NFH3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.07■□□□□ 0
NUP43Q8NFH3 MIR3687-2-201ENST00000577708 61 ntBASIC15.07■□□□□ 0
NUP43Q8NFH3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.07■□□□□ 0
NUP43Q8NFH3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.07■□□□□ 0
NUP43Q8NFH3 MIR3687-1-201ENST00000614492 61 ntBASIC15.07■□□□□ 0
NUP43Q8NFH3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
NUP43Q8NFH3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NUP43Q8NFH3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NUP43Q8NFH3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.07■□□□□ 0
NUP43Q8NFH3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.07■□□□□ 0
NUP43Q8NFH3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
NUP43Q8NFH3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.07■□□□□ 0
NUP43Q8NFH3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
NUP43Q8NFH3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NUP43Q8NFH3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.07■□□□□ 0
NUP43Q8NFH3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NUP43Q8NFH3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NUP43Q8NFH3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
NUP43Q8NFH3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
NUP43Q8NFH3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
NUP43Q8NFH3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NUP43Q8NFH3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.06■□□□□ 0
NUP43Q8NFH3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
NUP43Q8NFH3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NUP43Q8NFH3 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.06■□□□□ 0
NUP43Q8NFH3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NUP43Q8NFH3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
NUP43Q8NFH3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.06■□□□□ 0
NUP43Q8NFH3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NUP43Q8NFH3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
NUP43Q8NFH3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NUP43Q8NFH3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.06■□□□□ 0
NUP43Q8NFH3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
NUP43Q8NFH3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NUP43Q8NFH3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NUP43Q8NFH3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NUP43Q8NFH3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
NUP43Q8NFH3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NUP43Q8NFH3 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NUP43Q8NFH3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NUP43Q8NFH3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.06■□□□□ 0
NUP43Q8NFH3 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.06■□□□□ 0
NUP43Q8NFH3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.06■□□□□ 0
NUP43Q8NFH3 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NUP43Q8NFH3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.06■□□□□ 0
NUP43Q8NFH3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
NUP43Q8NFH3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.06■□□□□ 0
NUP43Q8NFH3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.06■□□□□ 0
NUP43Q8NFH3 AC243562.2-201ENST00000561247 970 ntBASIC15.06■□□□□ 0
NUP43Q8NFH3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.06■□□□□ 0
NUP43Q8NFH3 MIR4469-201ENST00000583919 79 ntBASIC15.06■□□□□ 0
NUP43Q8NFH3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.06■□□□□ 0
NUP43Q8NFH3 AC022145.2-201ENST00000598203 171 ntBASIC15.06■□□□□ 0
NUP43Q8NFH3 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NUP43Q8NFH3 AC105339.1-204ENST00000636249 355 ntBASIC15.06■□□□□ 0
NUP43Q8NFH3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
NUP43Q8NFH3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.06■□□□□ 0
NUP43Q8NFH3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.06■□□□□ 0
NUP43Q8NFH3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NUP43Q8NFH3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.06■□□□□ 0
NUP43Q8NFH3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.06■□□□□ 0
NUP43Q8NFH3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
NUP43Q8NFH3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
NUP43Q8NFH3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.06■□□□□ 0
NUP43Q8NFH3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.06■□□□□ 0
NUP43Q8NFH3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NUP43Q8NFH3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.06■□□□□ 0
NUP43Q8NFH3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NUP43Q8NFH3 AC068587.6-202ENST00000641839 5619 ntBASIC15.06■□□□□ 0
NUP43Q8NFH3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.06■□□□□ 0
NUP43Q8NFH3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.06■□□□□ 0
NUP43Q8NFH3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.06■□□□□ 0
NUP43Q8NFH3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NUP43Q8NFH3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.06■□□□□ 0
NUP43Q8NFH3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
NUP43Q8NFH3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.06■□□□□ 0
NUP43Q8NFH3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NUP43Q8NFH3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms