Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 ZNF890P-202ENST00000530367 1156 ntBASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 AJ011932.1-201ENST00000621707 465 ntBASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.79□□□□□ -0.04
C9orf40Q8IXQ3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 AC044860.1-202ENST00000559481 777 ntBASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 AL450472.2-201ENST00000603663 1156 ntBASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 AC008738.7-201ENST00000609744 511 ntBASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 MST1L-201ENST00000442552 2185 ntBASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
C9orf40Q8IXQ3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.77□□□□□ -0.04
C9orf40Q8IXQ3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
C9orf40Q8IXQ3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.77□□□□□ -0.04
C9orf40Q8IXQ3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
C9orf40Q8IXQ3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms