Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 AP003680.1-201ENST00000598970 3660 ntBASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 RNA5SP410-201ENST00000516285 106 ntBASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 FAM220BP-201ENST00000377689 816 ntBASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 SPCS2P4-201ENST00000436160 681 ntBASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 ACTG1P14-201ENST00000446382 1122 ntBASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 IGHV3-62-201ENST00000520057 340 ntBASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 AC243562.1-201ENST00000560672 389 ntBASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CDKL3Q8IVW4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.52■□□□□ 0.24
CDKL3Q8IVW4 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CDKL3Q8IVW4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKL3Q8IVW4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKL3Q8IVW4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.52■□□□□ 0.24
CDKL3Q8IVW4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKL3Q8IVW4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKL3Q8IVW4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.52■□□□□ 0.24
CDKL3Q8IVW4 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
CDKL3Q8IVW4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKL3Q8IVW4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.52■□□□□ 0.24
CDKL3Q8IVW4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKL3Q8IVW4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDKL3Q8IVW4 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CDKL3Q8IVW4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CDKL3Q8IVW4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKL3Q8IVW4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKL3Q8IVW4 AL022342.1-201ENST00000400363 863 ntBASIC16.52■□□□□ 0.24
CDKL3Q8IVW4 AC004832.2-201ENST00000426397 482 ntBASIC16.52■□□□□ 0.24
CDKL3Q8IVW4 AC079140.1-201ENST00000508039 487 ntBASIC16.52■□□□□ 0.24
CDKL3Q8IVW4 POLD2P1-201ENST00000511220 997 ntBASIC16.52■□□□□ 0.24
CDKL3Q8IVW4 KRT8P48-201ENST00000515599 1220 ntBASIC16.52■□□□□ 0.24
CDKL3Q8IVW4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.52■□□□□ 0.24
CDKL3Q8IVW4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.52■□□□□ 0.24
CDKL3Q8IVW4 KRT8P23-201ENST00000560090 1207 ntBASIC16.52■□□□□ 0.24
CDKL3Q8IVW4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.52■□□□□ 0.24
CDKL3Q8IVW4 AP000842.3-202ENST00000569238 1080 ntBASIC16.52■□□□□ 0.24
CDKL3Q8IVW4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms