Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.25■□□□□ 0.19
RAPH1Q70E73 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.25■□□□□ 0.19
RAPH1Q70E73 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.25■□□□□ 0.19
RAPH1Q70E73 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAPH1Q70E73 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.25■□□□□ 0.19
RAPH1Q70E73 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAPH1Q70E73 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
RAPH1Q70E73 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.25■□□□□ 0.19
RAPH1Q70E73 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAPH1Q70E73 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAPH1Q70E73 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAPH1Q70E73 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAPH1Q70E73 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAPH1Q70E73 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RAPH1Q70E73 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAPH1Q70E73 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAPH1Q70E73 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.25■□□□□ 0.19
RAPH1Q70E73 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAPH1Q70E73 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RAPH1Q70E73 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAPH1Q70E73 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RAPH1Q70E73 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAPH1Q70E73 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAPH1Q70E73 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAPH1Q70E73 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.24■□□□□ 0.19
RAPH1Q70E73 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAPH1Q70E73 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAPH1Q70E73 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.24■□□□□ 0.19
RAPH1Q70E73 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAPH1Q70E73 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.24■□□□□ 0.19
RAPH1Q70E73 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAPH1Q70E73 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAPH1Q70E73 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
RAPH1Q70E73 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAPH1Q70E73 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAPH1Q70E73 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAPH1Q70E73 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.24■□□□□ 0.19
RAPH1Q70E73 AL031284.1-201ENST00000419297 478 ntBASIC16.24■□□□□ 0.19
RAPH1Q70E73 AC098831.1-202ENST00000438821 336 ntBASIC16.24■□□□□ 0.19
RAPH1Q70E73 VN2R19P-201ENST00000442399 1052 ntBASIC16.24■□□□□ 0.19
RAPH1Q70E73 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAPH1Q70E73 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAPH1Q70E73 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
RAPH1Q70E73 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.24■□□□□ 0.19
RAPH1Q70E73 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.24■□□□□ 0.19
RAPH1Q70E73 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.24■□□□□ 0.19
RAPH1Q70E73 RN7SL510P-201ENST00000581311 263 ntBASIC16.24■□□□□ 0.19
RAPH1Q70E73 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.24■□□□□ 0.19
RAPH1Q70E73 AL049840.3-201ENST00000602669 611 ntBASIC16.24■□□□□ 0.19
RAPH1Q70E73 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.24■□□□□ 0.19
RAPH1Q70E73 AL691432.3-201ENST00000621860 400 ntBASIC16.24■□□□□ 0.19
RAPH1Q70E73 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.24■□□□□ 0.19
RAPH1Q70E73 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAPH1Q70E73 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAPH1Q70E73 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RAPH1Q70E73 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAPH1Q70E73 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RAPH1Q70E73 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAPH1Q70E73 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.24■□□□□ 0.19
RAPH1Q70E73 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAPH1Q70E73 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAPH1Q70E73 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RAPH1Q70E73 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.24■□□□□ 0.19
RAPH1Q70E73 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.24■□□□□ 0.19
RAPH1Q70E73 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAPH1Q70E73 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RAPH1Q70E73 AC013268.4-201ENST00000637413 2228 ntBASIC16.23■□□□□ 0.19
RAPH1Q70E73 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAPH1Q70E73 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RAPH1Q70E73 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.23■□□□□ 0.19
RAPH1Q70E73 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.23■□□□□ 0.19
RAPH1Q70E73 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAPH1Q70E73 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAPH1Q70E73 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAPH1Q70E73 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.23■□□□□ 0.19
RAPH1Q70E73 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAPH1Q70E73 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAPH1Q70E73 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.23■□□□□ 0.19
RAPH1Q70E73 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAPH1Q70E73 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAPH1Q70E73 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.23■□□□□ 0.19
RAPH1Q70E73 AC093909.1-201ENST00000504731 1122 ntBASIC16.23■□□□□ 0.19
RAPH1Q70E73 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.23■□□□□ 0.19
RAPH1Q70E73 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
RAPH1Q70E73 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.23■□□□□ 0.19
RAPH1Q70E73 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RAPH1Q70E73 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAPH1Q70E73 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAPH1Q70E73 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RAPH1Q70E73 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.23■□□□□ 0.19
RAPH1Q70E73 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.23■□□□□ 0.19
RAPH1Q70E73 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RAPH1Q70E73 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RAPH1Q70E73 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.23■□□□□ 0.19
RAPH1Q70E73 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.23■□□□□ 0.19
RAPH1Q70E73 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
RAPH1Q70E73 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RAPH1Q70E73 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RAPH1Q70E73 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RAPH1Q70E73 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms