Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRK2Q5S007 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRRK2Q5S007 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRK2Q5S007 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRRK2Q5S007 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.71□□□□□ -0.21
LRRK2Q5S007 AC074338.1-201ENST00000416825 156 ntBASIC13.71□□□□□ -0.21
LRRK2Q5S007 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.71□□□□□ -0.21
LRRK2Q5S007 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LRRK2Q5S007 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRRK2Q5S007 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.71□□□□□ -0.21
LRRK2Q5S007 PPY2P-201ENST00000582808 702 ntBASIC13.71□□□□□ -0.21
LRRK2Q5S007 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRRK2Q5S007 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.71□□□□□ -0.21
LRRK2Q5S007 MIR4321-201ENST00000592276 80 ntBASIC13.71□□□□□ -0.21
LRRK2Q5S007 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRRK2Q5S007 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRK2Q5S007 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.71□□□□□ -0.21
LRRK2Q5S007 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRRK2Q5S007 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRK2Q5S007 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRK2Q5S007 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRK2Q5S007 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRK2Q5S007 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.71□□□□□ -0.21
LRRK2Q5S007 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
LRRK2Q5S007 AC079328.2-201ENST00000561241 3354 ntBASIC13.71□□□□□ -0.21
LRRK2Q5S007 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRK2Q5S007 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRK2Q5S007 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRK2Q5S007 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.71□□□□□ -0.21
LRRK2Q5S007 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRRK2Q5S007 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC13.71□□□□□ -0.21
LRRK2Q5S007 CNN2P10-201ENST00000443067 918 ntBASIC13.71□□□□□ -0.21
LRRK2Q5S007 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.71□□□□□ -0.21
LRRK2Q5S007 RN7SL48P-201ENST00000579283 293 ntBASIC13.71□□□□□ -0.21
LRRK2Q5S007 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC13.71□□□□□ -0.21
LRRK2Q5S007 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRK2Q5S007 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.71□□□□□ -0.21
LRRK2Q5S007 AC132938.4-201ENST00000623835 848 ntBASIC13.71□□□□□ -0.21
LRRK2Q5S007 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRK2Q5S007 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC13.71□□□□□ -0.21
LRRK2Q5S007 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.71□□□□□ -0.21
LRRK2Q5S007 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.71□□□□□ -0.21
LRRK2Q5S007 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LRRK2Q5S007 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LRRK2Q5S007 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LRRK2Q5S007 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC13.71□□□□□ -0.22
LRRK2Q5S007 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC13.71□□□□□ -0.22
LRRK2Q5S007 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LRRK2Q5S007 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LRRK2Q5S007 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LRRK2Q5S007 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.7□□□□□ -0.22
LRRK2Q5S007 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
LRRK2Q5S007 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.7□□□□□ -0.22
LRRK2Q5S007 AL354877.1-201ENST00000424412 413 ntBASIC13.7□□□□□ -0.22
LRRK2Q5S007 KRT18P64-201ENST00000434946 1219 ntBASIC13.7□□□□□ -0.22
LRRK2Q5S007 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC13.7□□□□□ -0.22
LRRK2Q5S007 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
LRRK2Q5S007 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.7□□□□□ -0.22
LRRK2Q5S007 GMFG-209ENST00000600322 622 ntTSL 5 BASIC13.7□□□□□ -0.22
LRRK2Q5S007 AC138894.2-201ENST00000602838 371 ntBASIC13.7□□□□□ -0.22
LRRK2Q5S007 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC13.7□□□□□ -0.22
LRRK2Q5S007 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRK2Q5S007 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
LRRK2Q5S007 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRK2Q5S007 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRK2Q5S007 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRK2Q5S007 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
LRRK2Q5S007 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.7□□□□□ -0.22
LRRK2Q5S007 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
LRRK2Q5S007 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
LRRK2Q5S007 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LRRK2Q5S007 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.7□□□□□ -0.22
LRRK2Q5S007 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC13.7□□□□□ -0.22
LRRK2Q5S007 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRK2Q5S007 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRK2Q5S007 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LRRK2Q5S007 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.7□□□□□ -0.22
LRRK2Q5S007 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.7□□□□□ -0.22
LRRK2Q5S007 HIST2H2BB-201ENST00000449108 381 ntBASIC13.7□□□□□ -0.22
LRRK2Q5S007 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC13.7□□□□□ -0.22
LRRK2Q5S007 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.7□□□□□ -0.22
LRRK2Q5S007 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC13.7□□□□□ -0.22
LRRK2Q5S007 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.7□□□□□ -0.22
LRRK2Q5S007 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRK2Q5S007 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRK2Q5S007 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.7□□□□□ -0.22
LRRK2Q5S007 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRK2Q5S007 KRT8P35-201ENST00000483942 1338 ntBASIC13.7□□□□□ -0.22
LRRK2Q5S007 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRK2Q5S007 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRK2Q5S007 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRK2Q5S007 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.7□□□□□ -0.22
LRRK2Q5S007 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
LRRK2Q5S007 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.7□□□□□ -0.22
LRRK2Q5S007 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LRRK2Q5S007 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRK2Q5S007 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRK2Q5S007 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.69□□□□□ -0.22
LRRK2Q5S007 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRK2Q5S007 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms