Protein–RNA interactions for Protein: Q4G0U5

CFAP221, Cilia- and flagella-associated protein 221, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP221Q4G0U5 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CFAP221Q4G0U5 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CFAP221Q4G0U5 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.58■□□□□ 0.41
CFAP221Q4G0U5 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 KRT18P32-201ENST00000424695 1287 ntBASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 FAM58DP-201ENST00000428076 619 ntBASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 AC025678.2-201ENST00000562061 970 ntBASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 AL512652.2-201ENST00000625156 1716 ntBASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CFAP221Q4G0U5 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 AP005117.1-202ENST00000581724 1908 ntBASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 MIR346-201ENST00000362234 95 ntBASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 GPS2P2-201ENST00000430745 888 ntBASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 CYMP-203ENST00000474680 1263 ntBASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 KRT18P34-201ENST00000488218 1270 ntBASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 AC109322.1-201ENST00000524499 1264 ntBASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 AC015911.4-201ENST00000588022 1070 ntBASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 AC144831.1-201ENST00000573312 2656 ntBASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 AL031731.1-201ENST00000642131 2094 ntBASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 AC023824.1-201ENST00000562945 2975 ntBASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CFAP221Q4G0U5 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CFAP221Q4G0U5 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CFAP221Q4G0U5 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CFAP221Q4G0U5 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CFAP221Q4G0U5 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CFAP221Q4G0U5 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CFAP221Q4G0U5 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CFAP221Q4G0U5 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CFAP221Q4G0U5 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.56■□□□□ 0.4
CFAP221Q4G0U5 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CFAP221Q4G0U5 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CFAP221Q4G0U5 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CFAP221Q4G0U5 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CFAP221Q4G0U5 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CFAP221Q4G0U5 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CFAP221Q4G0U5 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms