Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 ST20-AS1-201ENST00000560255 4223 ntBASIC14.42□□□□□ -0.1
SCN1BQ07699 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.42□□□□□ -0.1
SCN1BQ07699 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.42□□□□□ -0.1
SCN1BQ07699 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.42□□□□□ -0.1
SCN1BQ07699 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SCN1BQ07699 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCN1BQ07699 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SCN1BQ07699 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCN1BQ07699 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SCN1BQ07699 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
SCN1BQ07699 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SCN1BQ07699 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCN1BQ07699 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.42□□□□□ -0.1
SCN1BQ07699 REXO1L8P-201ENST00000604378 1897 ntBASIC14.42□□□□□ -0.1
SCN1BQ07699 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCN1BQ07699 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCN1BQ07699 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCN1BQ07699 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.42□□□□□ -0.1
SCN1BQ07699 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCN1BQ07699 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCN1BQ07699 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SCN1BQ07699 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCN1BQ07699 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.42□□□□□ -0.1
SCN1BQ07699 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SCN1BQ07699 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SCN1BQ07699 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCN1BQ07699 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCN1BQ07699 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCN1BQ07699 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SCN1BQ07699 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCN1BQ07699 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCN1BQ07699 LINC00982-205ENST00000420957 435 ntBASIC14.42□□□□□ -0.1
SCN1BQ07699 NUS1P1-201ENST00000446295 882 ntBASIC14.42□□□□□ -0.1
SCN1BQ07699 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.42□□□□□ -0.1
SCN1BQ07699 BX005266.1-201ENST00000473402 457 ntBASIC14.42□□□□□ -0.1
SCN1BQ07699 MIR3652-201ENST00000579335 131 ntBASIC14.42□□□□□ -0.1
SCN1BQ07699 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SCN1BQ07699 AL732292.2-201ENST00000609649 430 ntBASIC14.42□□□□□ -0.1
SCN1BQ07699 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SCN1BQ07699 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SCN1BQ07699 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
SCN1BQ07699 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SCN1BQ07699 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.42□□□□□ -0.1
SCN1BQ07699 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SCN1BQ07699 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCN1BQ07699 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SCN1BQ07699 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCN1BQ07699 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.42□□□□□ -0.1
SCN1BQ07699 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCN1BQ07699 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SCN1BQ07699 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCN1BQ07699 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCN1BQ07699 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN1BQ07699 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SCN1BQ07699 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN1BQ07699 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.41□□□□□ -0.1
SCN1BQ07699 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN1BQ07699 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.41□□□□□ -0.1
SCN1BQ07699 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SCN1BQ07699 AC087386.2-201ENST00000623212 4637 ntBASIC14.41□□□□□ -0.1
SCN1BQ07699 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN1BQ07699 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SCN1BQ07699 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN1BQ07699 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN1BQ07699 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN1BQ07699 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN1BQ07699 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN1BQ07699 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.41□□□□□ -0.1
SCN1BQ07699 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.41□□□□□ -0.1
SCN1BQ07699 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN1BQ07699 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.41□□□□□ -0.1
SCN1BQ07699 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.41□□□□□ -0.1
SCN1BQ07699 ACTG1P4-201ENST00000425123 1122 ntBASIC14.41□□□□□ -0.1
SCN1BQ07699 HCG4P8-203ENST00000443049 980 ntBASIC14.41□□□□□ -0.1
SCN1BQ07699 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SCN1BQ07699 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
SCN1BQ07699 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.41□□□□□ -0.1
SCN1BQ07699 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
SCN1BQ07699 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SCN1BQ07699 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.41□□□□□ -0.1
SCN1BQ07699 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.41□□□□□ -0.1
SCN1BQ07699 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN1BQ07699 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SCN1BQ07699 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SCN1BQ07699 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.41□□□□□ -0.1
SCN1BQ07699 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.41□□□□□ -0.1
SCN1BQ07699 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN1BQ07699 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SCN1BQ07699 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SCN1BQ07699 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SCN1BQ07699 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN1BQ07699 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SCN1BQ07699 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN1BQ07699 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SCN1BQ07699 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN1BQ07699 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN1BQ07699 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN1BQ07699 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SCN1BQ07699 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SCN1BQ07699 AC079776.2-201ENST00000641154 1609 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms