Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.19□□□□□ -0.3
SPCS3P61009 AL121772.3-201ENST00000610840 674 ntBASIC13.19□□□□□ -0.3
SPCS3P61009 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.19□□□□□ -0.3
SPCS3P61009 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.19□□□□□ -0.3
SPCS3P61009 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13.19□□□□□ -0.3
SPCS3P61009 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.19□□□□□ -0.3
SPCS3P61009 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS3P61009 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS3P61009 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS3P61009 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS3P61009 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS3P61009 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS3P61009 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS3P61009 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.19□□□□□ -0.3
SPCS3P61009 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS3P61009 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS3P61009 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS3P61009 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS3P61009 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS3P61009 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SPCS3P61009 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SPCS3P61009 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.18□□□□□ -0.3
SPCS3P61009 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS3P61009 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.18□□□□□ -0.3
SPCS3P61009 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
SPCS3P61009 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.18□□□□□ -0.3
SPCS3P61009 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS3P61009 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.18□□□□□ -0.3
SPCS3P61009 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS3P61009 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS3P61009 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS3P61009 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.18□□□□□ -0.3
SPCS3P61009 RPS15P9-201ENST00000494093 319 ntBASIC13.18□□□□□ -0.3
SPCS3P61009 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC13.18□□□□□ -0.3
SPCS3P61009 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.18□□□□□ -0.3
SPCS3P61009 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.18□□□□□ -0.3
SPCS3P61009 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.18□□□□□ -0.3
SPCS3P61009 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.18□□□□□ -0.3
SPCS3P61009 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.18□□□□□ -0.3
SPCS3P61009 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS3P61009 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.18□□□□□ -0.3
SPCS3P61009 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS3P61009 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.18□□□□□ -0.3
SPCS3P61009 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS3P61009 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS3P61009 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS3P61009 AC107918.4-201ENST00000641966 3141 ntBASIC13.18□□□□□ -0.3
SPCS3P61009 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SPCS3P61009 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS3P61009 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS3P61009 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.18□□□□□ -0.3
SPCS3P61009 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS3P61009 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS3P61009 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS3P61009 SBF1P1-201ENST00000444527 5631 ntBASIC13.18□□□□□ -0.3
SPCS3P61009 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS3P61009 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.18□□□□□ -0.3
SPCS3P61009 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS3P61009 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SPCS3P61009 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS3P61009 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS3P61009 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS3P61009 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SPCS3P61009 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SPCS3P61009 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.17□□□□□ -0.3
SPCS3P61009 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.17□□□□□ -0.3
SPCS3P61009 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS3P61009 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS3P61009 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS3P61009 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS3P61009 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.17□□□□□ -0.3
SPCS3P61009 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SPCS3P61009 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS3P61009 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SPCS3P61009 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
SPCS3P61009 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS3P61009 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.17□□□□□ -0.3
SPCS3P61009 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.17□□□□□ -0.3
SPCS3P61009 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.17□□□□□ -0.3
SPCS3P61009 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS3P61009 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS3P61009 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.17□□□□□ -0.3
SPCS3P61009 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.17□□□□□ -0.3
SPCS3P61009 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.17□□□□□ -0.3
SPCS3P61009 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.17□□□□□ -0.3
SPCS3P61009 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.17□□□□□ -0.3
SPCS3P61009 AL160237.2-201ENST00000556165 472 ntBASIC13.17□□□□□ -0.3
SPCS3P61009 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.17□□□□□ -0.3
SPCS3P61009 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS3P61009 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SPCS3P61009 AC010327.5-201ENST00000586923 3061 ntBASIC13.17□□□□□ -0.3
SPCS3P61009 AC016027.1-202ENST00000607927 1699 ntBASIC13.17□□□□□ -0.3
SPCS3P61009 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
SPCS3P61009 AC007686.3-201ENST00000619017 3487 ntBASIC13.17□□□□□ -0.3
SPCS3P61009 AC012569.1-201ENST00000591191 1524 ntBASIC13.17□□□□□ -0.3
SPCS3P61009 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS3P61009 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.17□□□□□ -0.3
SPCS3P61009 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.17□□□□□ -0.3
SPCS3P61009 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS3P61009 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms