Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCKAP1LP55160 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.55■□□□□ 0.4
NCKAP1LP55160 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCKAP1LP55160 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NCKAP1LP55160 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1LP55160 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1LP55160 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.54■□□□□ 0.4
NCKAP1LP55160 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1LP55160 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1LP55160 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1LP55160 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.54■□□□□ 0.4
NCKAP1LP55160 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1LP55160 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.54■□□□□ 0.4
NCKAP1LP55160 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1LP55160 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1LP55160 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1LP55160 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1LP55160 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1LP55160 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1LP55160 AC136604.1-201ENST00000418535 575 ntBASIC17.54■□□□□ 0.4
NCKAP1LP55160 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.54■□□□□ 0.4
NCKAP1LP55160 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.54■□□□□ 0.4
NCKAP1LP55160 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.54■□□□□ 0.4
NCKAP1LP55160 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.54■□□□□ 0.4
NCKAP1LP55160 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1LP55160 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.54■□□□□ 0.4
NCKAP1LP55160 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.54■□□□□ 0.4
NCKAP1LP55160 AC025048.3-201ENST00000590609 569 ntBASIC17.54■□□□□ 0.4
NCKAP1LP55160 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NCKAP1LP55160 AC005702.4-201ENST00000618393 416 ntBASIC17.54■□□□□ 0.4
NCKAP1LP55160 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1LP55160 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1LP55160 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
NCKAP1LP55160 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.54■□□□□ 0.4
NCKAP1LP55160 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.54■□□□□ 0.4
NCKAP1LP55160 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NCKAP1LP55160 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1LP55160 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1LP55160 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.54■□□□□ 0.4
NCKAP1LP55160 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NCKAP1LP55160 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1LP55160 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1LP55160 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1LP55160 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1LP55160 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1LP55160 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1LP55160 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1LP55160 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NCKAP1LP55160 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1LP55160 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.54■□□□□ 0.4
NCKAP1LP55160 OR6D1P-203ENST00000641209 4860 ntBASIC17.54■□□□□ 0.4
NCKAP1LP55160 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NCKAP1LP55160 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.54■□□□□ 0.4
NCKAP1LP55160 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCKAP1LP55160 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.53■□□□□ 0.4
NCKAP1LP55160 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
NCKAP1LP55160 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.53■□□□□ 0.4
NCKAP1LP55160 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NCKAP1LP55160 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.53■□□□□ 0.4
NCKAP1LP55160 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.53■□□□□ 0.4
NCKAP1LP55160 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NCKAP1LP55160 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
NCKAP1LP55160 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCKAP1LP55160 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCKAP1LP55160 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NCKAP1LP55160 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.53■□□□□ 0.4
NCKAP1LP55160 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NCKAP1LP55160 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.53■□□□□ 0.4
NCKAP1LP55160 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.53■□□□□ 0.4
NCKAP1LP55160 MRPS18AP1-201ENST00000414458 589 ntBASIC17.53■□□□□ 0.4
NCKAP1LP55160 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.53■□□□□ 0.4
NCKAP1LP55160 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.53■□□□□ 0.4
NCKAP1LP55160 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.53■□□□□ 0.4
NCKAP1LP55160 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.53■□□□□ 0.4
NCKAP1LP55160 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCKAP1LP55160 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
NCKAP1LP55160 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NCKAP1LP55160 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.53■□□□□ 0.4
NCKAP1LP55160 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.53■□□□□ 0.4
NCKAP1LP55160 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCKAP1LP55160 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCKAP1LP55160 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCKAP1LP55160 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCKAP1LP55160 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.53■□□□□ 0.4
NCKAP1LP55160 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCKAP1LP55160 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NCKAP1LP55160 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.52■□□□□ 0.4
NCKAP1LP55160 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCKAP1LP55160 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCKAP1LP55160 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCKAP1LP55160 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.52■□□□□ 0.4
NCKAP1LP55160 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCKAP1LP55160 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NCKAP1LP55160 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.52■□□□□ 0.4
NCKAP1LP55160 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.52■□□□□ 0.4
NCKAP1LP55160 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NCKAP1LP55160 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCKAP1LP55160 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.52■□□□□ 0.4
NCKAP1LP55160 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.52■□□□□ 0.4
NCKAP1LP55160 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms