Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.15■□□□□ 0.02
SMSP52788 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.15■□□□□ 0.02
SMSP52788 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMSP52788 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMSP52788 AL031731.1-201ENST00000642131 2094 ntBASIC15.15■□□□□ 0.02
SMSP52788 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMSP52788 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.15■□□□□ 0.02
SMSP52788 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMSP52788 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.15■□□□□ 0.02
SMSP52788 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.15■□□□□ 0.02
SMSP52788 AC140658.5-201ENST00000438532 169 ntBASIC15.15■□□□□ 0.02
SMSP52788 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.15■□□□□ 0.02
SMSP52788 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.15■□□□□ 0.02
SMSP52788 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
SMSP52788 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SMSP52788 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.15■□□□□ 0.02
SMSP52788 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMSP52788 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.15■□□□□ 0.02
SMSP52788 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.15■□□□□ 0.02
SMSP52788 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SMSP52788 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.15■□□□□ 0.02
SMSP52788 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.15■□□□□ 0.02
SMSP52788 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
SMSP52788 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.15■□□□□ 0.02
SMSP52788 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
SMSP52788 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SMSP52788 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMSP52788 KRT8P39-201ENST00000396270 1433 ntBASIC15.15■□□□□ 0.02
SMSP52788 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SMSP52788 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.15■□□□□ 0.02
SMSP52788 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.15■□□□□ 0.02
SMSP52788 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.15■□□□□ 0.02
SMSP52788 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SMSP52788 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SMSP52788 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMSP52788 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMSP52788 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMSP52788 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
SMSP52788 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
SMSP52788 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SMSP52788 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.14■□□□□ 0.01
SMSP52788 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.14■□□□□ 0.01
SMSP52788 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMSP52788 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMSP52788 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMSP52788 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SMSP52788 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMSP52788 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMSP52788 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SMSP52788 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.14■□□□□ 0.01
SMSP52788 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMSP52788 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMSP52788 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.14■□□□□ 0.01
SMSP52788 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.14■□□□□ 0.01
SMSP52788 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.14■□□□□ 0.01
SMSP52788 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMSP52788 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMSP52788 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMSP52788 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.14■□□□□ 0.01
SMSP52788 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.14■□□□□ 0.01
SMSP52788 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SMSP52788 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.14■□□□□ 0.01
SMSP52788 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMSP52788 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMSP52788 KRT18P32-201ENST00000424695 1287 ntBASIC15.14■□□□□ 0.01
SMSP52788 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.14■□□□□ 0.01
SMSP52788 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.14■□□□□ 0.01
SMSP52788 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.14■□□□□ 0.01
SMSP52788 ADH5P3-201ENST00000433842 1137 ntBASIC15.14■□□□□ 0.01
SMSP52788 POU5F1P6-201ENST00000466990 990 ntBASIC15.14■□□□□ 0.01
SMSP52788 AC069335.1-201ENST00000489972 472 ntBASIC15.14■□□□□ 0.01
SMSP52788 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SMSP52788 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.14■□□□□ 0.01
SMSP52788 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.14■□□□□ 0.01
SMSP52788 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.14■□□□□ 0.01
SMSP52788 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.14■□□□□ 0.01
SMSP52788 AC093520.2-201ENST00000561830 333 ntBASIC15.14■□□□□ 0.01
SMSP52788 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.14■□□□□ 0.01
SMSP52788 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.14■□□□□ 0.01
SMSP52788 AL161645.1-201ENST00000622716 1255 ntBASIC15.14■□□□□ 0.01
SMSP52788 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SMSP52788 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.14■□□□□ 0.01
SMSP52788 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMSP52788 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SMSP52788 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.14■□□□□ 0.01
SMSP52788 AC010491.1-201ENST00000563101 2797 ntBASIC15.14■□□□□ 0.01
SMSP52788 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SMSP52788 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
SMSP52788 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.14■□□□□ 0.01
SMSP52788 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SMSP52788 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SMSP52788 AC104640.1-201ENST00000562617 2109 ntBASIC15.14■□□□□ 0.01
SMSP52788 AC067930.6-201ENST00000623257 4947 ntBASIC15.14■□□□□ 0.01
SMSP52788 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMSP52788 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.14■□□□□ 0.01
SMSP52788 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.14■□□□□ 0.01
SMSP52788 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMSP52788 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SMSP52788 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMSP52788 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms