Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CENPAP49450 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
CENPAP49450 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CENPAP49450 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CENPAP49450 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.68□□□□□ -0.06
CENPAP49450 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.68□□□□□ -0.06
CENPAP49450 FAM185BP-201ENST00000443595 716 ntBASIC14.68□□□□□ -0.06
CENPAP49450 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CENPAP49450 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.68□□□□□ -0.06
CENPAP49450 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CENPAP49450 OR7E47P-204ENST00000575924 449 ntBASIC14.68□□□□□ -0.06
CENPAP49450 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.68□□□□□ -0.06
CENPAP49450 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CENPAP49450 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CENPAP49450 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CENPAP49450 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CENPAP49450 AC010491.1-201ENST00000563101 2797 ntBASIC14.68□□□□□ -0.06
CENPAP49450 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CENPAP49450 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CENPAP49450 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CENPAP49450 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CENPAP49450 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.68□□□□□ -0.06
CENPAP49450 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CENPAP49450 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.68□□□□□ -0.06
CENPAP49450 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CENPAP49450 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CENPAP49450 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.68□□□□□ -0.06
CENPAP49450 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CENPAP49450 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CENPAP49450 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CENPAP49450 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CENPAP49450 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CENPAP49450 AL603832.2-201ENST00000566195 2125 ntBASIC14.68□□□□□ -0.06
CENPAP49450 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.68□□□□□ -0.06
CENPAP49450 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CENPAP49450 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CENPAP49450 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CENPAP49450 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.67□□□□□ -0.06
CENPAP49450 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CENPAP49450 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CENPAP49450 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.67□□□□□ -0.06
CENPAP49450 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.67□□□□□ -0.06
CENPAP49450 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CENPAP49450 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CENPAP49450 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.67□□□□□ -0.06
CENPAP49450 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.67□□□□□ -0.06
CENPAP49450 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CENPAP49450 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.67□□□□□ -0.06
CENPAP49450 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CENPAP49450 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CENPAP49450 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.67□□□□□ -0.06
CENPAP49450 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.67□□□□□ -0.06
CENPAP49450 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CENPAP49450 PMS2P4-201ENST00000412466 1052 ntBASIC14.67□□□□□ -0.06
CENPAP49450 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CENPAP49450 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.67□□□□□ -0.06
CENPAP49450 AP002469.2-201ENST00000531724 424 ntBASIC14.67□□□□□ -0.06
CENPAP49450 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.67□□□□□ -0.06
CENPAP49450 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.67□□□□□ -0.06
CENPAP49450 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.67□□□□□ -0.06
CENPAP49450 ACTL9-202ENST00000612068 1252 ntBASIC14.67□□□□□ -0.06
CENPAP49450 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
CENPAP49450 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.67□□□□□ -0.06
CENPAP49450 AC116407.3-201ENST00000623905 1129 ntBASIC14.67□□□□□ -0.06
CENPAP49450 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.67□□□□□ -0.06
CENPAP49450 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CENPAP49450 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CENPAP49450 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CENPAP49450 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.67□□□□□ -0.06
CENPAP49450 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CENPAP49450 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CENPAP49450 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CENPAP49450 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CENPAP49450 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.67□□□□□ -0.06
CENPAP49450 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CENPAP49450 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.67□□□□□ -0.06
CENPAP49450 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CENPAP49450 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CENPAP49450 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CENPAP49450 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CENPAP49450 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.67□□□□□ -0.06
CENPAP49450 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CENPAP49450 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CENPAP49450 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CENPAP49450 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
CENPAP49450 AL592424.1-201ENST00000563624 1536 ntBASIC14.66□□□□□ -0.06
CENPAP49450 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CENPAP49450 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
CENPAP49450 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CENPAP49450 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CENPAP49450 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CENPAP49450 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
CENPAP49450 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CENPAP49450 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CENPAP49450 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CENPAP49450 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CENPAP49450 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CENPAP49450 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CENPAP49450 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CENPAP49450 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms