Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NR4A2P43354 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
NR4A2P43354 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.72□□□□□ -0.05
NR4A2P43354 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NR4A2P43354 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NR4A2P43354 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NR4A2P43354 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NR4A2P43354 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NR4A2P43354 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NR4A2P43354 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.72□□□□□ -0.05
NR4A2P43354 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.72□□□□□ -0.05
NR4A2P43354 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.72□□□□□ -0.05
NR4A2P43354 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.72□□□□□ -0.05
NR4A2P43354 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.72□□□□□ -0.05
NR4A2P43354 AC136632.2-201ENST00000512891 861 ntBASIC14.72□□□□□ -0.05
NR4A2P43354 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
NR4A2P43354 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.72□□□□□ -0.05
NR4A2P43354 AC010327.4-202ENST00000591484 748 ntBASIC14.72□□□□□ -0.05
NR4A2P43354 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
NR4A2P43354 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
NR4A2P43354 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NR4A2P43354 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NR4A2P43354 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NR4A2P43354 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NR4A2P43354 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NR4A2P43354 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
NR4A2P43354 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
NR4A2P43354 CICP20-201ENST00000443330 2801 ntBASIC14.72□□□□□ -0.05
NR4A2P43354 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NR4A2P43354 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NR4A2P43354 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NR4A2P43354 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NR4A2P43354 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NR4A2P43354 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NR4A2P43354 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NR4A2P43354 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NR4A2P43354 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
NR4A2P43354 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NR4A2P43354 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NR4A2P43354 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.71□□□□□ -0.05
NR4A2P43354 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.71□□□□□ -0.05
NR4A2P43354 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
NR4A2P43354 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NR4A2P43354 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR4A2P43354 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR4A2P43354 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NR4A2P43354 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
NR4A2P43354 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.71□□□□□ -0.05
NR4A2P43354 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.71□□□□□ -0.05
NR4A2P43354 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
NR4A2P43354 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR4A2P43354 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
NR4A2P43354 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.71□□□□□ -0.05
NR4A2P43354 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR4A2P43354 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NR4A2P43354 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.71□□□□□ -0.05
NR4A2P43354 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NR4A2P43354 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR4A2P43354 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR4A2P43354 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.71□□□□□ -0.05
NR4A2P43354 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NR4A2P43354 AC073621.1-201ENST00000392730 636 ntBASIC14.71□□□□□ -0.05
NR4A2P43354 YBX2P1-201ENST00000394192 760 ntBASIC14.71□□□□□ -0.05
NR4A2P43354 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.71□□□□□ -0.05
NR4A2P43354 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
NR4A2P43354 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.71□□□□□ -0.05
NR4A2P43354 GPX1P2-201ENST00000429271 606 ntBASIC14.71□□□□□ -0.05
NR4A2P43354 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NR4A2P43354 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.71□□□□□ -0.05
NR4A2P43354 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
NR4A2P43354 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.71□□□□□ -0.05
NR4A2P43354 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR4A2P43354 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.71□□□□□ -0.05
NR4A2P43354 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.71□□□□□ -0.05
NR4A2P43354 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR4A2P43354 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.71□□□□□ -0.05
NR4A2P43354 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR4A2P43354 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR4A2P43354 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR4A2P43354 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
NR4A2P43354 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
NR4A2P43354 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
NR4A2P43354 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR4A2P43354 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR4A2P43354 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR4A2P43354 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NR4A2P43354 AL122018.1-201ENST00000446607 2310 ntBASIC14.71□□□□□ -0.05
NR4A2P43354 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NR4A2P43354 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
NR4A2P43354 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
NR4A2P43354 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
NR4A2P43354 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NR4A2P43354 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
NR4A2P43354 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
NR4A2P43354 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NR4A2P43354 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NR4A2P43354 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
NR4A2P43354 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NR4A2P43354 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NR4A2P43354 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms