Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A2P43004 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A2P43004 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.04■□□□□ 0.16
SLC1A2P43004 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.04■□□□□ 0.16
SLC1A2P43004 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A2P43004 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC1A2P43004 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC1A2P43004 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC1A2P43004 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
SLC1A2P43004 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC1A2P43004 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.04■□□□□ 0.16
SLC1A2P43004 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.04■□□□□ 0.16
SLC1A2P43004 LINC01225-203ENST00000563550 1244 ntBASIC16.04■□□□□ 0.16
SLC1A2P43004 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A2P43004 AC013268.4-201ENST00000637413 2228 ntBASIC16.04■□□□□ 0.16
SLC1A2P43004 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
SLC1A2P43004 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SLC1A2P43004 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC1A2P43004 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC1A2P43004 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A2P43004 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC1A2P43004 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A2P43004 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A2P43004 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A2P43004 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A2P43004 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.04■□□□□ 0.16
SLC1A2P43004 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A2P43004 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A2P43004 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC1A2P43004 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC1A2P43004 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC1A2P43004 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A2P43004 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
SLC1A2P43004 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A2P43004 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A2P43004 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A2P43004 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SLC1A2P43004 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A2P43004 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A2P43004 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A2P43004 MIR346-201ENST00000362234 95 ntBASIC16.03■□□□□ 0.16
SLC1A2P43004 FAM220BP-201ENST00000377689 816 ntBASIC16.03■□□□□ 0.16
SLC1A2P43004 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SLC1A2P43004 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC1A2P43004 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC1A2P43004 AC243562.2-201ENST00000561247 970 ntBASIC16.03■□□□□ 0.16
SLC1A2P43004 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A2P43004 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.03■□□□□ 0.16
SLC1A2P43004 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC1A2P43004 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC1A2P43004 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A2P43004 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A2P43004 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC1A2P43004 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A2P43004 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A2P43004 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A2P43004 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A2P43004 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A2P43004 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC1A2P43004 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A2P43004 AC018892.3-201ENST00000623986 2499 ntBASIC16.03■□□□□ 0.16
SLC1A2P43004 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SLC1A2P43004 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
SLC1A2P43004 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
SLC1A2P43004 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC1A2P43004 AL691432.1-201ENST00000596308 1422 ntBASIC16.02■□□□□ 0.16
SLC1A2P43004 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC1A2P43004 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC1A2P43004 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC1A2P43004 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC1A2P43004 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SLC1A2P43004 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SLC1A2P43004 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC1A2P43004 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC1A2P43004 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC1A2P43004 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC1A2P43004 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC1A2P43004 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC1A2P43004 BNIP3P1-202ENST00000550043 1585 ntBASIC16.02■□□□□ 0.16
SLC1A2P43004 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC1A2P43004 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC1A2P43004 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC1A2P43004 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC1A2P43004 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.02■□□□□ 0.16
SLC1A2P43004 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.02■□□□□ 0.16
SLC1A2P43004 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.02■□□□□ 0.16
SLC1A2P43004 HTR5BP-201ENST00000430851 1154 ntBASIC16.02■□□□□ 0.16
SLC1A2P43004 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC1A2P43004 ACTG1P14-201ENST00000446382 1122 ntBASIC16.02■□□□□ 0.16
SLC1A2P43004 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
SLC1A2P43004 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SLC1A2P43004 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC1A2P43004 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC1A2P43004 IGHV3-62-201ENST00000520057 340 ntBASIC16.02■□□□□ 0.16
SLC1A2P43004 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.02■□□□□ 0.16
SLC1A2P43004 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.02■□□□□ 0.16
SLC1A2P43004 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SLC1A2P43004 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.02■□□□□ 0.16
SLC1A2P43004 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.02■□□□□ 0.16
SLC1A2P43004 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms