Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.78■□□□□ 0.28
MTHFRP42898 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.78■□□□□ 0.28
MTHFRP42898 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.78■□□□□ 0.28
MTHFRP42898 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
MTHFRP42898 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MTHFRP42898 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MTHFRP42898 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.78■□□□□ 0.28
MTHFRP42898 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MTHFRP42898 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MTHFRP42898 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.78■□□□□ 0.28
MTHFRP42898 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.78■□□□□ 0.28
MTHFRP42898 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MTHFRP42898 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MTHFRP42898 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MTHFRP42898 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
MTHFRP42898 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MTHFRP42898 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
MTHFRP42898 AL031731.1-201ENST00000642131 2094 ntBASIC16.77■□□□□ 0.28
MTHFRP42898 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MTHFRP42898 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.77■□□□□ 0.28
MTHFRP42898 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MTHFRP42898 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MTHFRP42898 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
MTHFRP42898 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MTHFRP42898 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MTHFRP42898 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.77■□□□□ 0.28
MTHFRP42898 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.77■□□□□ 0.28
MTHFRP42898 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MTHFRP42898 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
MTHFRP42898 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MTHFRP42898 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MTHFRP42898 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
MTHFRP42898 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
MTHFRP42898 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
MTHFRP42898 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
MTHFRP42898 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MTHFRP42898 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MTHFRP42898 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
MTHFRP42898 AC092933.1-201ENST00000393644 945 ntBASIC16.77■□□□□ 0.28
MTHFRP42898 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
MTHFRP42898 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.77■□□□□ 0.28
MTHFRP42898 FAM21FP-201ENST00000426241 1131 ntBASIC16.77■□□□□ 0.28
MTHFRP42898 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.77■□□□□ 0.28
MTHFRP42898 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.77■□□□□ 0.28
MTHFRP42898 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.77■□□□□ 0.28
MTHFRP42898 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.77■□□□□ 0.28
MTHFRP42898 TDH-203ENST00000531764 1110 ntBASIC16.77■□□□□ 0.28
MTHFRP42898 MIR5189-201ENST00000577370 114 ntBASIC16.77■□□□□ 0.28
MTHFRP42898 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.77■□□□□ 0.28
MTHFRP42898 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.77■□□□□ 0.28
MTHFRP42898 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.77■□□□□ 0.28
MTHFRP42898 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
MTHFRP42898 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MTHFRP42898 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
MTHFRP42898 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MTHFRP42898 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.77■□□□□ 0.27
MTHFRP42898 UBALD1-205ENST00000590891 2641 ntBASIC16.77■□□□□ 0.27
MTHFRP42898 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MTHFRP42898 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
MTHFRP42898 AC020907.1-201ENST00000616460 1350 ntBASIC16.77■□□□□ 0.27
MTHFRP42898 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MTHFRP42898 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.76■□□□□ 0.27
MTHFRP42898 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
MTHFRP42898 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MTHFRP42898 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MTHFRP42898 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.76■□□□□ 0.27
MTHFRP42898 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MTHFRP42898 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MTHFRP42898 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MTHFRP42898 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
MTHFRP42898 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MTHFRP42898 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MTHFRP42898 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MTHFRP42898 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MTHFRP42898 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MTHFRP42898 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MTHFRP42898 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MTHFRP42898 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MTHFRP42898 BCYRN1-201ENST00000418539 200 ntBASIC16.76■□□□□ 0.27
MTHFRP42898 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.76■□□□□ 0.27
MTHFRP42898 FO681548.1-201ENST00000455617 1132 ntBASIC16.76■□□□□ 0.27
MTHFRP42898 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.76■□□□□ 0.27
MTHFRP42898 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.76■□□□□ 0.27
MTHFRP42898 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.76■□□□□ 0.27
MTHFRP42898 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.76■□□□□ 0.27
MTHFRP42898 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
MTHFRP42898 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.76■□□□□ 0.27
MTHFRP42898 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.76■□□□□ 0.27
MTHFRP42898 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.76■□□□□ 0.27
MTHFRP42898 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
MTHFRP42898 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.76■□□□□ 0.27
MTHFRP42898 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
MTHFRP42898 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
MTHFRP42898 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
MTHFRP42898 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MTHFRP42898 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.76■□□□□ 0.27
MTHFRP42898 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MTHFRP42898 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MTHFRP42898 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MTHFRP42898 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms