Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA1P42261 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA1P42261 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA1P42261 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA1P42261 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.31■□□□□ 0.2
GRIA1P42261 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA1P42261 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA1P42261 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
GRIA1P42261 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA1P42261 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA1P42261 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA1P42261 MIR346-201ENST00000362234 95 ntBASIC16.31■□□□□ 0.2
GRIA1P42261 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA1P42261 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
GRIA1P42261 YBX2P1-201ENST00000394192 760 ntBASIC16.31■□□□□ 0.2
GRIA1P42261 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.31■□□□□ 0.2
GRIA1P42261 ALG1L5P-201ENST00000482043 771 ntBASIC16.31■□□□□ 0.2
GRIA1P42261 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.31■□□□□ 0.2
GRIA1P42261 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA1P42261 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA1P42261 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.31■□□□□ 0.2
GRIA1P42261 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.31■□□□□ 0.2
GRIA1P42261 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
GRIA1P42261 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA1P42261 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA1P42261 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA1P42261 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA1P42261 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.31■□□□□ 0.2
GRIA1P42261 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
GRIA1P42261 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA1P42261 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA1P42261 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA1P42261 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA1P42261 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA1P42261 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.31■□□□□ 0.2
GRIA1P42261 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA1P42261 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
GRIA1P42261 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
GRIA1P42261 BNIP3P1-202ENST00000550043 1585 ntBASIC16.3■□□□□ 0.2
GRIA1P42261 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA1P42261 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
GRIA1P42261 AC009090.5-201ENST00000624886 2285 ntBASIC16.3■□□□□ 0.2
GRIA1P42261 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.3■□□□□ 0.2
GRIA1P42261 AL691432.1-201ENST00000596308 1422 ntBASIC16.3■□□□□ 0.2
GRIA1P42261 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA1P42261 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA1P42261 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
GRIA1P42261 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.3■□□□□ 0.2
GRIA1P42261 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA1P42261 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA1P42261 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
GRIA1P42261 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA1P42261 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA1P42261 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.3■□□□□ 0.2
GRIA1P42261 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.3■□□□□ 0.2
GRIA1P42261 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.3■□□□□ 0.2
GRIA1P42261 AP000842.3-202ENST00000569238 1080 ntBASIC16.3■□□□□ 0.2
GRIA1P42261 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.3■□□□□ 0.2
GRIA1P42261 AC026120.1-201ENST00000611536 926 ntBASIC16.3■□□□□ 0.2
GRIA1P42261 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA1P42261 AC020658.6-201ENST00000623564 1870 ntBASIC16.3■□□□□ 0.2
GRIA1P42261 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA1P42261 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
GRIA1P42261 AL136982.4-201ENST00000437689 1740 ntBASIC16.3■□□□□ 0.2
GRIA1P42261 AC022532.1-201ENST00000624563 1728 ntBASIC16.3■□□□□ 0.2
GRIA1P42261 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.3■□□□□ 0.2
GRIA1P42261 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA1P42261 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA1P42261 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA1P42261 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA1P42261 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA1P42261 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRIA1P42261 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.29■□□□□ 0.2
GRIA1P42261 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRIA1P42261 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRIA1P42261 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRIA1P42261 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRIA1P42261 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.29■□□□□ 0.2
GRIA1P42261 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GRIA1P42261 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRIA1P42261 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRIA1P42261 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRIA1P42261 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.29■□□□□ 0.2
GRIA1P42261 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.29■□□□□ 0.2
GRIA1P42261 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRIA1P42261 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
GRIA1P42261 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GRIA1P42261 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
GRIA1P42261 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRIA1P42261 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRIA1P42261 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
GRIA1P42261 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GRIA1P42261 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRIA1P42261 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.29■□□□□ 0.2
GRIA1P42261 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GRIA1P42261 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.29■□□□□ 0.2
GRIA1P42261 AC004832.2-201ENST00000426397 482 ntBASIC16.29■□□□□ 0.2
GRIA1P42261 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.29■□□□□ 0.2
GRIA1P42261 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.29■□□□□ 0.2
GRIA1P42261 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms