Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNCAP37840 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SNCAP37840 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SNCAP37840 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNCAP37840 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNCAP37840 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SNCAP37840 LINC00528-201ENST00000600723 2160 ntBASIC13.32□□□□□ -0.28
SNCAP37840 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNCAP37840 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.32□□□□□ -0.28
SNCAP37840 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNCAP37840 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SNCAP37840 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.32□□□□□ -0.28
SNCAP37840 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SNCAP37840 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SNCAP37840 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNCAP37840 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNCAP37840 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNCAP37840 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNCAP37840 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.31□□□□□ -0.28
SNCAP37840 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNCAP37840 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
SNCAP37840 GGT3P-204ENST00000453783 1664 ntBASIC13.31□□□□□ -0.28
SNCAP37840 AC016027.1-202ENST00000607927 1699 ntBASIC13.31□□□□□ -0.28
SNCAP37840 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.31□□□□□ -0.28
SNCAP37840 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNCAP37840 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SNCAP37840 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.31□□□□□ -0.28
SNCAP37840 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
SNCAP37840 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SNCAP37840 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
SNCAP37840 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNCAP37840 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SNCAP37840 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNCAP37840 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.31□□□□□ -0.28
SNCAP37840 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SNCAP37840 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.31□□□□□ -0.28
SNCAP37840 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.31□□□□□ -0.28
SNCAP37840 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.31□□□□□ -0.28
SNCAP37840 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC13.31□□□□□ -0.28
SNCAP37840 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.31□□□□□ -0.28
SNCAP37840 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.31□□□□□ -0.28
SNCAP37840 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.31□□□□□ -0.28
SNCAP37840 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.31□□□□□ -0.28
SNCAP37840 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SNCAP37840 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.31□□□□□ -0.28
SNCAP37840 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNCAP37840 FOSL1P1-201ENST00000511041 816 ntBASIC13.31□□□□□ -0.28
SNCAP37840 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.31□□□□□ -0.28
SNCAP37840 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNCAP37840 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.31□□□□□ -0.28
SNCAP37840 MTDHP3-201ENST00000594186 672 ntBASIC13.31□□□□□ -0.28
SNCAP37840 AF228730.7-201ENST00000641842 219 ntBASIC13.31□□□□□ -0.28
SNCAP37840 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNCAP37840 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNCAP37840 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNCAP37840 AL671710.1-201ENST00000610245 2349 ntBASIC13.31□□□□□ -0.28
SNCAP37840 AC136621.1-201ENST00000624017 2304 ntBASIC13.31□□□□□ -0.28
SNCAP37840 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNCAP37840 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.31□□□□□ -0.28
SNCAP37840 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.31□□□□□ -0.28
SNCAP37840 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.31□□□□□ -0.28
SNCAP37840 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNCAP37840 LINC01101-201ENST00000622953 1884 ntBASIC13.31□□□□□ -0.28
SNCAP37840 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNCAP37840 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SNCAP37840 AC007191.1-201ENST00000623179 2995 ntBASIC13.31□□□□□ -0.28
SNCAP37840 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNCAP37840 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.31□□□□□ -0.28
SNCAP37840 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.31□□□□□ -0.28
SNCAP37840 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNCAP37840 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.31□□□□□ -0.28
SNCAP37840 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SNCAP37840 PI4KAP1-204ENST00000612579 1703 ntBASIC13.3□□□□□ -0.28
SNCAP37840 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.3□□□□□ -0.28
SNCAP37840 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNCAP37840 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNCAP37840 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SNCAP37840 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNCAP37840 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNCAP37840 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNCAP37840 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SNCAP37840 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNCAP37840 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNCAP37840 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SNCAP37840 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SNCAP37840 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SNCAP37840 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNCAP37840 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNCAP37840 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNCAP37840 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.3□□□□□ -0.28
SNCAP37840 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SNCAP37840 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SNCAP37840 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.3□□□□□ -0.28
SNCAP37840 SCARNA2-201ENST00000458748 420 ntBASIC13.3□□□□□ -0.28
SNCAP37840 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.3□□□□□ -0.28
SNCAP37840 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.3□□□□□ -0.28
SNCAP37840 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNCAP37840 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
SNCAP37840 AC091167.2-201ENST00000579581 588 ntBASIC13.3□□□□□ -0.28
SNCAP37840 MPDU1-223ENST00000582151 728 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms