Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCK1P35558 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCK1P35558 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
PCK1P35558 AC112504.1-201ENST00000623415 1841 ntBASIC17.01■□□□□ 0.31
PCK1P35558 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCK1P35558 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.01■□□□□ 0.31
PCK1P35558 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
PCK1P35558 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCK1P35558 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCK1P35558 MIR940-201ENST00000401276 94 ntBASIC17.01■□□□□ 0.31
PCK1P35558 AC004832.2-201ENST00000426397 482 ntBASIC17.01■□□□□ 0.31
PCK1P35558 AL671277.1-201ENST00000429656 993 ntBASIC17.01■□□□□ 0.31
PCK1P35558 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCK1P35558 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCK1P35558 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.01■□□□□ 0.31
PCK1P35558 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PCK1P35558 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.01■□□□□ 0.31
PCK1P35558 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.01■□□□□ 0.31
PCK1P35558 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
PCK1P35558 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PCK1P35558 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCK1P35558 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCK1P35558 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCK1P35558 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCK1P35558 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PCK1P35558 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PCK1P35558 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.01■□□□□ 0.31
PCK1P35558 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
PCK1P35558 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PCK1P35558 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCK1P35558 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCK1P35558 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCK1P35558 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PCK1P35558 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCK1P35558 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17■□□□□ 0.31
PCK1P35558 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17■□□□□ 0.31
PCK1P35558 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCK1P35558 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PCK1P35558 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCK1P35558 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCK1P35558 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PCK1P35558 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCK1P35558 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCK1P35558 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PCK1P35558 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PCK1P35558 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCK1P35558 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PCK1P35558 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCK1P35558 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCK1P35558 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCK1P35558 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCK1P35558 ADH5P3-201ENST00000433842 1137 ntBASIC17■□□□□ 0.31
PCK1P35558 FAM58CP-201ENST00000435741 640 ntBASIC17■□□□□ 0.31
PCK1P35558 AC008677.1-201ENST00000519230 1561 ntBASIC17■□□□□ 0.31
PCK1P35558 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17■□□□□ 0.31
PCK1P35558 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17■□□□□ 0.31
PCK1P35558 MIR4321-201ENST00000592276 80 ntBASIC17■□□□□ 0.31
PCK1P35558 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCK1P35558 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
PCK1P35558 SUPT20HL2-201ENST00000486479 2409 ntBASIC17■□□□□ 0.31
PCK1P35558 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PCK1P35558 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCK1P35558 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC17■□□□□ 0.31
PCK1P35558 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCK1P35558 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17■□□□□ 0.31
PCK1P35558 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PCK1P35558 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
PCK1P35558 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17■□□□□ 0.31
PCK1P35558 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17■□□□□ 0.31
PCK1P35558 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.99■□□□□ 0.31
PCK1P35558 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.99■□□□□ 0.31
PCK1P35558 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
PCK1P35558 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCK1P35558 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCK1P35558 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCK1P35558 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCK1P35558 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCK1P35558 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PCK1P35558 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCK1P35558 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCK1P35558 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCK1P35558 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.99■□□□□ 0.31
PCK1P35558 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCK1P35558 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCK1P35558 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PCK1P35558 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCK1P35558 AC010491.1-201ENST00000563101 2797 ntBASIC16.99■□□□□ 0.31
PCK1P35558 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCK1P35558 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.99■□□□□ 0.31
PCK1P35558 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.99■□□□□ 0.31
PCK1P35558 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCK1P35558 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCK1P35558 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.99■□□□□ 0.31
PCK1P35558 TFAMP1-201ENST00000412727 736 ntBASIC16.99■□□□□ 0.31
PCK1P35558 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.99■□□□□ 0.31
PCK1P35558 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
PCK1P35558 RN7SL589P-201ENST00000481268 310 ntBASIC16.99■□□□□ 0.31
PCK1P35558 POLD2P1-201ENST00000511220 997 ntBASIC16.99■□□□□ 0.31
PCK1P35558 AC105233.2-201ENST00000523697 349 ntBASIC16.99■□□□□ 0.31
PCK1P35558 AF228730.5-201ENST00000530288 346 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms