Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RORAP35398 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RORAP35398 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.29■□□□□ 0.04
RORAP35398 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.29■□□□□ 0.04
RORAP35398 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RORAP35398 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.29■□□□□ 0.04
RORAP35398 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.29■□□□□ 0.04
RORAP35398 AC135586.1-201ENST00000539323 574 ntBASIC15.29■□□□□ 0.04
RORAP35398 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.29■□□□□ 0.04
RORAP35398 AL035252.4-201ENST00000624174 288 ntBASIC15.29■□□□□ 0.04
RORAP35398 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RORAP35398 AL033527.5-202ENST00000641632 1098 ntBASIC15.29■□□□□ 0.04
RORAP35398 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RORAP35398 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RORAP35398 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RORAP35398 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.29■□□□□ 0.04
RORAP35398 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RORAP35398 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.29■□□□□ 0.04
RORAP35398 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RORAP35398 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RORAP35398 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RORAP35398 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RORAP35398 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RORAP35398 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RORAP35398 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.28■□□□□ 0.04
RORAP35398 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RORAP35398 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.28■□□□□ 0.04
RORAP35398 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.28■□□□□ 0.04
RORAP35398 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RORAP35398 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RORAP35398 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.28■□□□□ 0.04
RORAP35398 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RORAP35398 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.28■□□□□ 0.04
RORAP35398 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RORAP35398 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RORAP35398 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RORAP35398 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.28■□□□□ 0.04
RORAP35398 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RORAP35398 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
RORAP35398 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RORAP35398 AC005034.1-201ENST00000426657 489 ntBASIC15.28■□□□□ 0.04
RORAP35398 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.28■□□□□ 0.04
RORAP35398 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.28■□□□□ 0.04
RORAP35398 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.28■□□□□ 0.04
RORAP35398 AC027307.3-201ENST00000594262 1100 ntBASIC15.28■□□□□ 0.04
RORAP35398 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RORAP35398 AC025048.6-201ENST00000634326 1161 ntBASIC15.28■□□□□ 0.04
RORAP35398 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RORAP35398 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RORAP35398 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RORAP35398 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
RORAP35398 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RORAP35398 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.28■□□□□ 0.04
RORAP35398 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
RORAP35398 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RORAP35398 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.28■□□□□ 0.04
RORAP35398 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RORAP35398 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.28■□□□□ 0.04
RORAP35398 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RORAP35398 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RORAP35398 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RORAP35398 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RORAP35398 AL592424.1-201ENST00000563624 1536 ntBASIC15.27■□□□□ 0.04
RORAP35398 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RORAP35398 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RORAP35398 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RORAP35398 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RORAP35398 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RORAP35398 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.27■□□□□ 0.04
RORAP35398 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.27■□□□□ 0.04
RORAP35398 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
RORAP35398 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.27■□□□□ 0.04
RORAP35398 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RORAP35398 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RORAP35398 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RORAP35398 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RORAP35398 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RORAP35398 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.27■□□□□ 0.04
RORAP35398 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RORAP35398 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RORAP35398 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RORAP35398 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RORAP35398 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RORAP35398 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.27■□□□□ 0.04
RORAP35398 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RORAP35398 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.27■□□□□ 0.04
RORAP35398 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.27■□□□□ 0.04
RORAP35398 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RORAP35398 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.27■□□□□ 0.04
RORAP35398 AC044860.1-202ENST00000559481 777 ntBASIC15.27■□□□□ 0.04
RORAP35398 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.27■□□□□ 0.04
RORAP35398 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.27■□□□□ 0.04
RORAP35398 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.27■□□□□ 0.04
RORAP35398 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RORAP35398 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.27■□□□□ 0.04
RORAP35398 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.27■□□□□ 0.04
RORAP35398 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.27■□□□□ 0.03
RORAP35398 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RORAP35398 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RORAP35398 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms