Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC19.99■□□□□ 0.79
RFC4P35249 IFT20-206ENST00000578122 834 ntTSL 2 BASIC19.99■□□□□ 0.79
RFC4P35249 IFT20-208ENST00000578985 831 ntTSL 3 BASIC19.99■□□□□ 0.79
RFC4P35249 AC000095.1-201ENST00000603208 874 ntBASIC19.99■□□□□ 0.79
RFC4P35249 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC19.99■□□□□ 0.79
RFC4P35249 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFC4P35249 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFC4P35249 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RFC4P35249 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC19.99■□□□□ 0.79
RFC4P35249 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RFC4P35249 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
RFC4P35249 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFC4P35249 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFC4P35249 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RFC4P35249 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.99■□□□□ 0.79
RFC4P35249 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RFC4P35249 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC4P35249 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
RFC4P35249 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.98■□□□□ 0.79
RFC4P35249 AC139713.2-201ENST00000641328 2723 ntBASIC19.98■□□□□ 0.79
RFC4P35249 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC19.98■□□□□ 0.79
RFC4P35249 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RFC4P35249 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
RFC4P35249 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC4P35249 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC4P35249 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RFC4P35249 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC19.98■□□□□ 0.79
RFC4P35249 Z93015.1-201ENST00000451718 390 ntBASIC19.98■□□□□ 0.79
RFC4P35249 IGHJ2P-201ENST00000454480 60 ntBASIC19.98■□□□□ 0.79
RFC4P35249 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.98■□□□□ 0.79
RFC4P35249 ARTN-209ENST00000479128 471 ntTSL 3 BASIC19.98■□□□□ 0.79
RFC4P35249 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC19.98■□□□□ 0.79
RFC4P35249 RNA5SP423-201ENST00000517127 109 ntBASIC19.98■□□□□ 0.79
RFC4P35249 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC4P35249 AC025279.2-201ENST00000569730 653 ntBASIC19.98■□□□□ 0.79
RFC4P35249 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC19.98■□□□□ 0.79
RFC4P35249 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RFC4P35249 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC19.98■□□□□ 0.79
RFC4P35249 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC19.98■□□□□ 0.79
RFC4P35249 PRKN-211ENST00000615065 261 ntTSL 5 BASIC19.98■□□□□ 0.79
RFC4P35249 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC4P35249 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC19.98■□□□□ 0.79
RFC4P35249 HLA-A-202ENST00000376806 1854 ntBASIC19.98■□□□□ 0.79
RFC4P35249 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.98■□□□□ 0.79
RFC4P35249 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC4P35249 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC4P35249 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RFC4P35249 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC4P35249 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC4P35249 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RFC4P35249 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RFC4P35249 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.98■□□□□ 0.79
RFC4P35249 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RFC4P35249 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RFC4P35249 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RFC4P35249 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RFC4P35249 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
RFC4P35249 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
RFC4P35249 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFC4P35249 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.97■□□□□ 0.79
RFC4P35249 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFC4P35249 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RFC4P35249 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RFC4P35249 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RFC4P35249 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RFC4P35249 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.97■□□□□ 0.79
RFC4P35249 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFC4P35249 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RFC4P35249 AC136604.1-201ENST00000418535 575 ntBASIC19.97■□□□□ 0.79
RFC4P35249 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFC4P35249 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC19.97■□□□□ 0.79
RFC4P35249 OARD1-212ENST00000482515 832 ntTSL 2 BASIC19.97■□□□□ 0.79
RFC4P35249 PFN2-215ENST00000497148 743 ntTSL 4 BASIC19.97■□□□□ 0.79
RFC4P35249 AC026410.3-201ENST00000514280 936 ntBASIC19.97■□□□□ 0.79
RFC4P35249 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
RFC4P35249 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC19.97■□□□□ 0.79
RFC4P35249 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC19.97■□□□□ 0.79
RFC4P35249 KSR1-207ENST00000578981 748 ntTSL 4 BASIC19.97■□□□□ 0.79
RFC4P35249 AL450472.2-201ENST00000603663 1156 ntBASIC19.97■□□□□ 0.79
RFC4P35249 AC093813.1-201ENST00000605066 256 ntBASIC19.97■□□□□ 0.79
RFC4P35249 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC19.97■□□□□ 0.79
RFC4P35249 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RFC4P35249 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFC4P35249 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFC4P35249 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.97■□□□□ 0.79
RFC4P35249 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFC4P35249 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RFC4P35249 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.97■□□□□ 0.79
RFC4P35249 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFC4P35249 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFC4P35249 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFC4P35249 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFC4P35249 AL121723.1-201ENST00000445194 1519 ntBASIC19.97■□□□□ 0.79
RFC4P35249 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
RFC4P35249 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RFC4P35249 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFC4P35249 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC19.96■□□□□ 0.79
RFC4P35249 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.96■□□□□ 0.79
RFC4P35249 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RFC4P35249 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms