Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC21.37■■□□□ 1.01
USP6P35125 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC21.37■■□□□ 1.01
USP6P35125 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC21.37■■□□□ 1.01
USP6P35125 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC21.37■■□□□ 1.01
USP6P35125 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC21.37■■□□□ 1.01
USP6P35125 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
USP6P35125 AC244093.1-201ENST00000610837 814 ntBASIC21.37■■□□□ 1.01
USP6P35125 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
USP6P35125 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC21.37■■□□□ 1.01
USP6P35125 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.37■■□□□ 1.01
USP6P35125 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
USP6P35125 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
USP6P35125 FLII-221ENST00000578558 2377 ntTSL 5 BASIC21.37■■□□□ 1.01
USP6P35125 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC21.37■■□□□ 1.01
USP6P35125 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
USP6P35125 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
USP6P35125 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
USP6P35125 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC21.36■■□□□ 1.01
USP6P35125 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
USP6P35125 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC21.36■■□□□ 1.01
USP6P35125 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
USP6P35125 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
USP6P35125 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC21.36■■□□□ 1.01
USP6P35125 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC21.36■■□□□ 1.01
USP6P35125 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
USP6P35125 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC21.36■■□□□ 1.01
USP6P35125 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
USP6P35125 AP001582.1-201ENST00000525856 295 ntBASIC21.36■■□□□ 1.01
USP6P35125 AGER-214ENST00000538695 487 ntTSL 2 BASIC21.36■■□□□ 1.01
USP6P35125 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC21.36■■□□□ 1.01
USP6P35125 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC21.36■■□□□ 1.01
USP6P35125 UBL5-208ENST00000593087 320 ntTSL 3 BASIC21.36■■□□□ 1.01
USP6P35125 AC010328.2-201ENST00000597698 1111 ntBASIC21.36■■□□□ 1.01
USP6P35125 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
USP6P35125 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
USP6P35125 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
USP6P35125 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
USP6P35125 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
USP6P35125 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC21.35■■□□□ 1.01
USP6P35125 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
USP6P35125 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC21.35■■□□□ 1.01
USP6P35125 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
USP6P35125 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.35■■□□□ 1.01
USP6P35125 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
USP6P35125 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
USP6P35125 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
USP6P35125 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
USP6P35125 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
USP6P35125 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
USP6P35125 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC21.35■■□□□ 1.01
USP6P35125 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
USP6P35125 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC21.35■■□□□ 1.01
USP6P35125 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
USP6P35125 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC21.35■■□□□ 1.01
USP6P35125 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC21.35■■□□□ 1.01
USP6P35125 EMC4-209ENST00000559421 497 ntTSL 2 BASIC21.35■■□□□ 1.01
USP6P35125 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC21.35■■□□□ 1.01
USP6P35125 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
USP6P35125 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC21.35■■□□□ 1.01
USP6P35125 AL138709.1-201ENST00000614840 1693 ntBASIC21.34■■□□□ 1.01
USP6P35125 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP6P35125 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP6P35125 POLL-217ENST00000628479 1953 ntTSL 5 BASIC21.34■■□□□ 1.01
USP6P35125 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC21.34■■□□□ 1.01
USP6P35125 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP6P35125 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
USP6P35125 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP6P35125 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
USP6P35125 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP6P35125 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
USP6P35125 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP6P35125 GUK1-206ENST00000366723 845 ntTSL 5 BASIC21.34■■□□□ 1.01
USP6P35125 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP6P35125 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP6P35125 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
USP6P35125 RN7SL560P-201ENST00000577943 264 ntBASIC21.34■■□□□ 1.01
USP6P35125 KSR1-207ENST00000578981 748 ntTSL 4 BASIC21.34■■□□□ 1.01
USP6P35125 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP6P35125 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP6P35125 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
USP6P35125 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
USP6P35125 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
USP6P35125 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
USP6P35125 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC21.34■■□□□ 1.01
USP6P35125 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP6P35125 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP6P35125 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
USP6P35125 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC21.33■■□□□ 1.01
USP6P35125 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
USP6P35125 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
USP6P35125 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
USP6P35125 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
USP6P35125 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC21.33■■□□□ 1.01
USP6P35125 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
USP6P35125 PGGT1BP2-201ENST00000398621 1028 ntBASIC21.33■■□□□ 1.01
USP6P35125 MIR1247-201ENST00000408206 136 ntBASIC21.33■■□□□ 1.01
USP6P35125 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
USP6P35125 C2orf27AP3-201ENST00000434123 579 ntBASIC21.33■■□□□ 1.01
USP6P35125 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC21.33■■□□□ 1.01
USP6P35125 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms