Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.59■□□□□ 0.89
RXRBP28702 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC20.59■□□□□ 0.89
RXRBP28702 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RXRBP28702 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RXRBP28702 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RXRBP28702 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RXRBP28702 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
RXRBP28702 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RXRBP28702 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.58■□□□□ 0.89
RXRBP28702 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RXRBP28702 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
RXRBP28702 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RXRBP28702 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
RXRBP28702 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RXRBP28702 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RXRBP28702 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RXRBP28702 AP000356.3-201ENST00000382243 753 ntBASIC20.58■□□□□ 0.89
RXRBP28702 AL133267.1-201ENST00000398220 340 ntBASIC20.58■□□□□ 0.89
RXRBP28702 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC20.58■□□□□ 0.89
RXRBP28702 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC20.58■□□□□ 0.89
RXRBP28702 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC20.58■□□□□ 0.89
RXRBP28702 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
RXRBP28702 AC138894.2-201ENST00000602838 371 ntBASIC20.58■□□□□ 0.89
RXRBP28702 AC073413.1-201ENST00000603927 732 ntBASIC20.58■□□□□ 0.89
RXRBP28702 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC20.58■□□□□ 0.89
RXRBP28702 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC20.58■□□□□ 0.89
RXRBP28702 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RXRBP28702 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RXRBP28702 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
RXRBP28702 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC20.58■□□□□ 0.88
RXRBP28702 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
RXRBP28702 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RXRBP28702 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
RXRBP28702 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RXRBP28702 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC20.57■□□□□ 0.88
RXRBP28702 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RXRBP28702 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RXRBP28702 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RXRBP28702 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
RXRBP28702 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RXRBP28702 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RXRBP28702 RNU1-114P-201ENST00000365297 166 ntBASIC20.57■□□□□ 0.88
RXRBP28702 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RXRBP28702 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.57■□□□□ 0.88
RXRBP28702 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RXRBP28702 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RXRBP28702 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC20.57■□□□□ 0.88
RXRBP28702 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC20.57■□□□□ 0.88
RXRBP28702 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
RXRBP28702 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC20.57■□□□□ 0.88
RXRBP28702 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RXRBP28702 AL118516.1-201ENST00000564152 670 ntBASIC20.57■□□□□ 0.88
RXRBP28702 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC20.57■□□□□ 0.88
RXRBP28702 AL161773.1-201ENST00000624845 863 ntBASIC20.57■□□□□ 0.88
RXRBP28702 AC068587.8-201ENST00000641239 219 ntBASIC20.57■□□□□ 0.88
RXRBP28702 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RXRBP28702 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RXRBP28702 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RXRBP28702 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC20.57■□□□□ 0.88
RXRBP28702 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
RXRBP28702 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.57■□□□□ 0.88
RXRBP28702 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.57■□□□□ 0.88
RXRBP28702 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
RXRBP28702 AC020916.1-201ENST00000587762 1774 ntBASIC20.57■□□□□ 0.88
RXRBP28702 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RXRBP28702 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC20.56■□□□□ 0.88
RXRBP28702 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RXRBP28702 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
RXRBP28702 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RXRBP28702 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RXRBP28702 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RXRBP28702 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RXRBP28702 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
RXRBP28702 AC136604.1-201ENST00000418535 575 ntBASIC20.56■□□□□ 0.88
RXRBP28702 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC20.56■□□□□ 0.88
RXRBP28702 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC20.56■□□□□ 0.88
RXRBP28702 DDX39AP1-201ENST00000445147 1181 ntBASIC20.56■□□□□ 0.88
RXRBP28702 PUDPP3-201ENST00000445368 636 ntBASIC20.56■□□□□ 0.88
RXRBP28702 AC073150.1-201ENST00000450406 1084 ntBASIC20.56■□□□□ 0.88
RXRBP28702 PHKG1P2-201ENST00000457537 863 ntBASIC20.56■□□□□ 0.88
RXRBP28702 TUBB8P8-201ENST00000458717 1058 ntBASIC20.56■□□□□ 0.88
RXRBP28702 FOS-204ENST00000554617 796 ntTSL 2 BASIC20.56■□□□□ 0.88
RXRBP28702 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC20.56■□□□□ 0.88
RXRBP28702 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC20.56■□□□□ 0.88
RXRBP28702 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RXRBP28702 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RXRBP28702 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RXRBP28702 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RXRBP28702 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RXRBP28702 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.56■□□□□ 0.88
RXRBP28702 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RXRBP28702 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RXRBP28702 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC20.56■□□□□ 0.88
RXRBP28702 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC20.55■□□□□ 0.88
RXRBP28702 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.55■□□□□ 0.88
RXRBP28702 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RXRBP28702 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RXRBP28702 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.55■□□□□ 0.88
RXRBP28702 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RXRBP28702 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms