Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.83□□□□□ -0.03
ABCD3P28288 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.83□□□□□ -0.03
ABCD3P28288 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
ABCD3P28288 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.83□□□□□ -0.03
ABCD3P28288 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ABCD3P28288 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.83□□□□□ -0.04
ABCD3P28288 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ABCD3P28288 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
ABCD3P28288 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
ABCD3P28288 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ABCD3P28288 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.83□□□□□ -0.04
ABCD3P28288 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
ABCD3P28288 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ABCD3P28288 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ABCD3P28288 TREML5P-201ENST00000421694 576 ntBASIC14.83□□□□□ -0.04
ABCD3P28288 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ABCD3P28288 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
ABCD3P28288 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
ABCD3P28288 HLA-V-204ENST00000476601 1289 ntBASIC14.83□□□□□ -0.04
ABCD3P28288 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ABCD3P28288 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.83□□□□□ -0.04
ABCD3P28288 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.83□□□□□ -0.04
ABCD3P28288 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.83□□□□□ -0.04
ABCD3P28288 SPDYE12P-201ENST00000618416 771 ntBASIC14.83□□□□□ -0.04
ABCD3P28288 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
ABCD3P28288 AC073592.8-201ENST00000624126 511 ntBASIC14.83□□□□□ -0.04
ABCD3P28288 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.83□□□□□ -0.04
ABCD3P28288 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
ABCD3P28288 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.83□□□□□ -0.04
ABCD3P28288 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.83□□□□□ -0.04
ABCD3P28288 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.83□□□□□ -0.04
ABCD3P28288 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ABCD3P28288 FO538757.1-201ENST00000623083 1397 ntBASIC14.83□□□□□ -0.04
ABCD3P28288 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.83□□□□□ -0.04
ABCD3P28288 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.83□□□□□ -0.04
ABCD3P28288 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
ABCD3P28288 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ABCD3P28288 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ABCD3P28288 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
ABCD3P28288 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ABCD3P28288 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
ABCD3P28288 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
ABCD3P28288 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ABCD3P28288 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ABCD3P28288 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ABCD3P28288 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ABCD3P28288 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ABCD3P28288 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ABCD3P28288 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
ABCD3P28288 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ABCD3P28288 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ABCD3P28288 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
ABCD3P28288 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ABCD3P28288 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ABCD3P28288 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ABCD3P28288 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ABCD3P28288 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ABCD3P28288 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.82□□□□□ -0.04
ABCD3P28288 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.82□□□□□ -0.04
ABCD3P28288 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ABCD3P28288 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ABCD3P28288 AC097493.3-201ENST00000509725 367 ntBASIC14.82□□□□□ -0.04
ABCD3P28288 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.82□□□□□ -0.04
ABCD3P28288 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.82□□□□□ -0.04
ABCD3P28288 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
ABCD3P28288 AL079307.3-201ENST00000556114 283 ntBASIC14.82□□□□□ -0.04
ABCD3P28288 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.82□□□□□ -0.04
ABCD3P28288 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.82□□□□□ -0.04
ABCD3P28288 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.82□□□□□ -0.04
ABCD3P28288 AL138828.2-201ENST00000615812 383 ntBASIC14.82□□□□□ -0.04
ABCD3P28288 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.82□□□□□ -0.04
ABCD3P28288 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ABCD3P28288 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ABCD3P28288 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ABCD3P28288 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.82□□□□□ -0.04
ABCD3P28288 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ABCD3P28288 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.82□□□□□ -0.04
ABCD3P28288 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ABCD3P28288 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.82□□□□□ -0.04
ABCD3P28288 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.82□□□□□ -0.04
ABCD3P28288 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
ABCD3P28288 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.82□□□□□ -0.04
ABCD3P28288 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ABCD3P28288 LINC00554-201ENST00000564841 3011 ntBASIC14.82□□□□□ -0.04
ABCD3P28288 AC026691.1-201ENST00000602502 2017 ntBASIC14.82□□□□□ -0.04
ABCD3P28288 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.82□□□□□ -0.04
ABCD3P28288 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
ABCD3P28288 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ABCD3P28288 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ABCD3P28288 AC024909.3-201ENST00000611513 2257 ntBASIC14.81□□□□□ -0.04
ABCD3P28288 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
ABCD3P28288 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.81□□□□□ -0.04
ABCD3P28288 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
ABCD3P28288 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
ABCD3P28288 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ABCD3P28288 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ABCD3P28288 SPDYE17-201ENST00000412399 783 ntBASIC14.81□□□□□ -0.04
ABCD3P28288 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.81□□□□□ -0.04
ABCD3P28288 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.81□□□□□ -0.04
ABCD3P28288 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms